RNA–Protein interactions for RNA: ENST00000561544.1

AC009065.7-201, humanhuman

TSL 3 BASIC

Gene AC009065.7, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009065.7-201ENST00000561544 DDR1Q08345 913 aa15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 SLFN5Q08AF3 891 aa15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 DDX21Q9NR30 783 aaKnown RBP eCLIP15.6■□□□□ 0.09
AC009065.7-201ENST00000561544 E9PSI1 815 aa15.59■□□□□ 0.09
AC009065.7-201ENST00000561544 ZBTB3Q9H5J0 574 aa15.59■□□□□ 0.09
AC009065.7-201ENST00000561544 COL11A2P13942 1736 aaPredicted RBP15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 NFIXQ14938 502 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 HLFQ16534 295 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 TBC1D9BQ66K14 1250 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 BICDL1Q6ZP65 573 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 DBF4Q9UBU7 674 aaPredicted RBP15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 MAP3K15Q6ZN16 1313 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 C10orf71Q711Q0 1435 aa15.58■□□□□ 0.08
AC009065.7-201ENST00000561544 AIMP1Q12904 312 aaKnown RBP15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 FHDC1Q9C0D6 1143 aaPredicted RBP15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 BRCA1P38398 1863 aaKnown RBP15.57■□□□□ 0.08
AC009065.7-201ENST00000561544 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 VAMP4O75379 141 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 TM4SF1P30408 202 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 CCDC30Q5VVM6 783 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 COPS6Q7L5N1 327 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 TRMT2AQ8IZ69 625 aaKnown RBP15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 PHAXQ9H814 394 aaKnown RBP15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 ZBED9Q6R2W3 1325 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
AC009065.7-201ENST00000561544 ATP10DQ9P241 1426 aa15.55■□□□□ 0.08
AC009065.7-201ENST00000561544 CARMIL3Q8ND23 1372 aa15.55■□□□□ 0.08
AC009065.7-201ENST00000561544 HYPKQ9NX55 129 aa15.55■□□□□ 0.08
AC009065.7-201ENST00000561544 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
AC009065.7-201ENST00000561544 CACNA1SQ13698 1873 aa15.54■□□□□ 0.08
AC009065.7-201ENST00000561544 ZNF652Q9Y2D9 606 aa15.54■□□□□ 0.08
AC009065.7-201ENST00000561544 ERVV-1B6SEH8 477 aa15.53■□□□□ 0.08
AC009065.7-201ENST00000561544 G2E3Q7L622 706 aa15.53■□□□□ 0.08
AC009065.7-201ENST00000561544 NLGN2Q8NFZ4 835 aa15.53■□□□□ 0.08
AC009065.7-201ENST00000561544 STK31Q9BXU1 1019 aa15.53■□□□□ 0.08
AC009065.7-201ENST00000561544 LAMB2P55268 1798 aa15.53■□□□□ 0.08
AC009065.7-201ENST00000561544 PXDNLA1KZ92 1463 aa15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 UBN2Q6ZU65 1347 aa15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 GPTP24298 496 aa15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 GIGYF2Q6Y7W6 1299 aaKnown RBP15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 NIP7Q9Y221 180 aaKnown RBP eCLIP15.52■□□□□ 0.08
AC009065.7-201ENST00000561544 DDX60Q8IY21 1712 aaKnown RBP15.51■□□□□ 0.07
AC009065.7-201ENST00000561544 RGL2O15211 777 aa15.51■□□□□ 0.07
AC009065.7-201ENST00000561544 SERPINB2P05120 415 aa15.51■□□□□ 0.07
AC009065.7-201ENST00000561544 SETDB2Q96T68 719 aa15.51■□□□□ 0.07
AC009065.7-201ENST00000561544 SYT17Q9BSW7 474 aa15.51■□□□□ 0.07
AC009065.7-201ENST00000561544 ADCY9O60503 1353 aa15.5■□□□□ 0.07
AC009065.7-201ENST00000561544 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
AC009065.7-201ENST00000561544 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
AC009065.7-201ENST00000561544 CCDC24Q8N4L8 307 aa15.5■□□□□ 0.07
AC009065.7-201ENST00000561544 PLBD2Q8NHP8 589 aa15.5■□□□□ 0.07
AC009065.7-201ENST00000561544 PRR5LQ6MZQ0 368 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 ANKRD13DQ6ZTN6 518 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 ZNF34Q8IZ26 560 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 ZNF428Q96B54 188 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
AC009065.7-201ENST00000561544 FLIIQ13045 1269 aa15.48■□□□□ 0.07
AC009065.7-201ENST00000561544 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
AC009065.7-201ENST00000561544 CNBD1Q8NA66 436 aa15.48■□□□□ 0.07
AC009065.7-201ENST00000561544 BCL2L13Q9BXK5 485 aa15.48■□□□□ 0.07
AC009065.7-201ENST00000561544 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
AC009065.7-201ENST00000561544 RIC3Q7Z5B4 369 aa15.47■□□□□ 0.07
AC009065.7-201ENST00000561544 SSH1Q8WYL5 1049 aa15.47■□□□□ 0.07
AC009065.7-201ENST00000561544 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
AC009065.7-201ENST00000561544 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 NPHP1O15259 732 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 SUSD4Q5VX71 490 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 WWC3Q9ULE0 1092 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 MAP3K2Q9Y2U5 619 aa15.46■□□□□ 0.07
AC009065.7-201ENST00000561544 PI4KAP2A4QPH2 592 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 NTSR2O95665 410 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 DDX58O95786 925 aaKnown RBP15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 MRPL50Q8N5N7 158 aaKnown RBP15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 PI4KAP1Q8N8J0 262 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 MYD88Q99836 296 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 MYH3P11055 1940 aa15.45■□□□□ 0.06
AC009065.7-201ENST00000561544 A0A0G2JLW4 131 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 CHRNA5P30532 468 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 HSP90AB3PQ58FF7 597 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 KSR2Q6VAB6 950 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 ISCA1Q9BUE6 129 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 SMC4Q9NTJ3 1288 aa15.44■□□□□ 0.06
AC009065.7-201ENST00000561544 RIC1Q4ADV7 1423 aa15.43■□□□□ 0.06
AC009065.7-201ENST00000561544 F6X3S4 739 aa15.43■□□□□ 0.06
AC009065.7-201ENST00000561544 DPEP1P16444 411 aa15.43■□□□□ 0.06
AC009065.7-201ENST00000561544 ST5P78524 1137 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms