RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 MIER1Q8N108 512 aa9.16□□□□□ -0.94
SPG11-224ENST00000561268 FMNL2Q96PY5 1086 aa9.16□□□□□ -0.94
SPG11-224ENST00000561268 TEX13AQ9BXU3 409 aaPredicted RBP9.16□□□□□ -0.94
SPG11-224ENST00000561268 WDR90Q96KV7 1748 aa9.16□□□□□ -0.94
SPG11-224ENST00000561268 MYBBP1AQ9BQG0 1328 aaKnown RBP9.15□□□□□ -0.94
SPG11-224ENST00000561268 KCNQ3O43525 872 aa9.15□□□□□ -0.94
SPG11-224ENST00000561268 STARD3NLO95772 234 aa9.15□□□□□ -0.94
SPG11-224ENST00000561268 NFIXQ14938 502 aa9.15□□□□□ -0.94
SPG11-224ENST00000561268 USPL1Q5W0Q7 1092 aa9.15□□□□□ -0.94
SPG11-224ENST00000561268 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
SPG11-224ENST00000561268 MYH3P11055 1940 aa9.14□□□□□ -0.95
SPG11-224ENST00000561268 GALR2O43603 387 aaPredicted RBP9.14□□□□□ -0.95
SPG11-224ENST00000561268 SNED1Q8TER0 1413 aa9.14□□□□□ -0.95
SPG11-224ENST00000561268 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
SPG11-224ENST00000561268 SCN4AP35499 1836 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 A0A087WZG4 1122 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 BTBD11A6QL63 1104 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 CAMTA2O94983 1202 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 DPEP1P16444 411 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 CNGB1Q14028 1251 aaPredicted RBP9.13□□□□□ -0.95
SPG11-224ENST00000561268 NFE2L2Q16236 605 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 MCM10Q7L590 875 aa9.13□□□□□ -0.95
SPG11-224ENST00000561268 ZPR1O75312 459 aa9.12□□□□□ -0.95
SPG11-224ENST00000561268 DCTN1Q14203 1278 aa9.12□□□□□ -0.95
SPG11-224ENST00000561268 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
SPG11-224ENST00000561268 ADAMTSL1Q8N6G6 1762 aa9.12□□□□□ -0.95
SPG11-224ENST00000561268 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 PSME4Q14997 1843 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 A0A0G2JLW4 131 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 SNRPA1P09661 255 aaKnown RBP9.11□□□□□ -0.95
SPG11-224ENST00000561268 CANXP27824 592 aaKnown RBP9.11□□□□□ -0.95
SPG11-224ENST00000561268 TAF7Q15545 349 aaPredicted RBP9.11□□□□□ -0.95
SPG11-224ENST00000561268 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
SPG11-224ENST00000561268 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 CREBZFQ9NS37 354 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 USP16Q9Y5T5 823 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 TAF1P21675 1872 aa9.11□□□□□ -0.95
SPG11-224ENST00000561268 ERBB4Q15303 1308 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 ZC3H4Q9UPT8 1303 aaKnown RBP9.1□□□□□ -0.95
SPG11-224ENST00000561268 A1BGP04217 495 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 SERPINB2P05120 415 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 TBC1D9BQ66K14 1250 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 CLEC4GQ6UXB4 293 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 LRP10Q7Z4F1 713 aa9.1□□□□□ -0.95
SPG11-224ENST00000561268 PNISRQ8TF01 805 aaKnown RBP9.1□□□□□ -0.95
SPG11-224ENST00000561268 PRKRIP1Q9H875 184 aaPredicted RBP9.1□□□□□ -0.95
SPG11-224ENST00000561268 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
SPG11-224ENST00000561268 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 EIF4A1P60842 406 aaKnown RBP9.09□□□□□ -0.95
SPG11-224ENST00000561268 PRR5LQ6MZQ0 368 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 PNNQ9H307 717 aaKnown RBP9.09□□□□□ -0.95
SPG11-224ENST00000561268 BABAM1Q9NWV8 329 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 PIM2Q9P1W9 311 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 BCS1LQ9Y276 419 aa9.09□□□□□ -0.95
SPG11-224ENST00000561268 CCER2I3L3R5 266 aa9.08□□□□□ -0.96
SPG11-224ENST00000561268 CHRNA5P30532 468 aa9.08□□□□□ -0.96
SPG11-224ENST00000561268 TMPOP42166 694 aaKnown RBP9.08□□□□□ -0.96
SPG11-224ENST00000561268 DDX10Q13206 875 aaKnown RBP9.08□□□□□ -0.96
SPG11-224ENST00000561268 DZIP3Q86Y13 1208 aaKnown RBP9.08□□□□□ -0.96
SPG11-224ENST00000561268 A0A1B0GUL6 1792 aa9.08□□□□□ -0.96
SPG11-224ENST00000561268 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
SPG11-224ENST00000561268 LTBP3Q9NS15 1303 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 KLRG2A4D1S0 409 aaPredicted RBP9.07□□□□□ -0.96
SPG11-224ENST00000561268 KIF3CO14782 793 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 NEFMP07197 916 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 DALRD3Q5D0E6 543 aaKnown RBP9.07□□□□□ -0.96
SPG11-224ENST00000561268 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
SPG11-224ENST00000561268 BRIP1Q9BX63 1249 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 WWC3Q9ULE0 1092 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 TBC1D2BQ9UPU7 963 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 ABCC12Q96J65 1359 aa9.07□□□□□ -0.96
SPG11-224ENST00000561268 SPEF2Q9C093 1822 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 ERVV-1B6SEH8 477 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 NFKBIEO00221 500 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 PIP4K2AP48426 406 aaPredicted RBP9.06□□□□□ -0.96
SPG11-224ENST00000561268 PRELPP51888 382 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 LMOD3Q0VAK6 560 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 CNBD1Q8NA66 436 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 PHF12Q96QT6 1004 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 ZNF652Q9Y2D9 606 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 DUOX1Q9NRD9 1551 aa9.06□□□□□ -0.96
SPG11-224ENST00000561268 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
SPG11-224ENST00000561268 POTEB2H3BUK9 544 aa9.05□□□□□ -0.96
SPG11-224ENST00000561268 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
SPG11-224ENST00000561268 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
SPG11-224ENST00000561268 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
SPG11-224ENST00000561268 TRPM7Q96QT4 1865 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 COL4A1P02462 1669 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 COL4A5P29400 1685 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 POTEMA6NI47 508 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 SRGNP10124 158 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 PDE6BP35913 854 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 PDIA6Q15084 440 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 CRY2Q49AN0 593 aa9.04□□□□□ -0.96
SPG11-224ENST00000561268 STYK1Q6J9G0 422 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms