RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
CRTC3-213ENST00000561255 ABHD8Q96I13 439 aa16.35■□□□□ 0.21
CRTC3-213ENST00000561255 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
CRTC3-213ENST00000561255 HSPA8P11142 646 aaKnown RBP16.34■□□□□ 0.21
CRTC3-213ENST00000561255 DEFB115Q30KQ5 88 aa16.34■□□□□ 0.21
CRTC3-213ENST00000561255 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
CRTC3-213ENST00000561255 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-213ENST00000561255 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
CRTC3-213ENST00000561255 NPHP1O15259 732 aa16.33■□□□□ 0.2
CRTC3-213ENST00000561255 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
CRTC3-213ENST00000561255 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-213ENST00000561255 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-213ENST00000561255 ZNF790Q6PG37 636 aa16.33■□□□□ 0.2
CRTC3-213ENST00000561255 PNMA8AQ86V59 439 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-213ENST00000561255 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.2
CRTC3-213ENST00000561255 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
CRTC3-213ENST00000561255 EPHX2P34913 555 aa16.32■□□□□ 0.2
CRTC3-213ENST00000561255 FKBP4Q02790 459 aaKnown RBP eCLIP16.32■□□□□ 0.2
CRTC3-213ENST00000561255 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
CRTC3-213ENST00000561255 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
CRTC3-213ENST00000561255 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
CRTC3-213ENST00000561255 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
CRTC3-213ENST00000561255 WDR33Q9C0J8 1336 aaKnown RBP16.31■□□□□ 0.2
CRTC3-213ENST00000561255 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
CRTC3-213ENST00000561255 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
CRTC3-213ENST00000561255 FAM161AQ3B820 660 aa16.31■□□□□ 0.2
CRTC3-213ENST00000561255 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
CRTC3-213ENST00000561255 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-213ENST00000561255 A1BGP04217 495 aa16.3■□□□□ 0.2
CRTC3-213ENST00000561255 NPR1P16066 1061 aa16.3■□□□□ 0.2
CRTC3-213ENST00000561255 TEFQ10587 303 aa16.3■□□□□ 0.2
CRTC3-213ENST00000561255 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
CRTC3-213ENST00000561255 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
CRTC3-213ENST00000561255 FZD9O00144 591 aa16.29■□□□□ 0.2
CRTC3-213ENST00000561255 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
CRTC3-213ENST00000561255 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
CRTC3-213ENST00000561255 CLEC4GQ6UXB4 293 aa16.29■□□□□ 0.2
CRTC3-213ENST00000561255 DZIP3Q86Y13 1208 aaKnown RBP16.29■□□□□ 0.2
CRTC3-213ENST00000561255 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
CRTC3-213ENST00000561255 IL17REQ8NFR9 667 aa16.29■□□□□ 0.2
CRTC3-213ENST00000561255 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
CRTC3-213ENST00000561255 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
CRTC3-213ENST00000561255 RGS19P49795 217 aa16.28■□□□□ 0.2
CRTC3-213ENST00000561255 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-213ENST00000561255 NBPF5PQ86XG9 351 aaPredicted RBP16.28■□□□□ 0.2
CRTC3-213ENST00000561255 GPC2Q8N158 579 aa16.28■□□□□ 0.2
CRTC3-213ENST00000561255 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
CRTC3-213ENST00000561255 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
CRTC3-213ENST00000561255 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
CRTC3-213ENST00000561255 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
CRTC3-213ENST00000561255 RGL2O15211 777 aa16.26■□□□□ 0.19
CRTC3-213ENST00000561255 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
CRTC3-213ENST00000561255 MLLT1Q03111 559 aaPredicted RBP16.26■□□□□ 0.19
CRTC3-213ENST00000561255 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
CRTC3-213ENST00000561255 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
CRTC3-213ENST00000561255 PCDH10Q9P2E7 1040 aa16.26■□□□□ 0.19
CRTC3-213ENST00000561255 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CRTC3-213ENST00000561255 TPTE2Q6XPS3 522 aa16.25■□□□□ 0.19
CRTC3-213ENST00000561255 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CRTC3-213ENST00000561255 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
CRTC3-213ENST00000561255 OLFM4Q6UX06 510 aa16.24■□□□□ 0.19
CRTC3-213ENST00000561255 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
CRTC3-213ENST00000561255 PSMD1Q99460 953 aa16.24■□□□□ 0.19
CRTC3-213ENST00000561255 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
CRTC3-213ENST00000561255 ECE1P42892 770 aa16.23■□□□□ 0.19
CRTC3-213ENST00000561255 CAPNS2Q96L46 248 aa16.23■□□□□ 0.19
CRTC3-213ENST00000561255 BEGAINQ9BUH8 593 aa16.23■□□□□ 0.19
CRTC3-213ENST00000561255 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
CRTC3-213ENST00000561255 CCDC85CA6NKD9 419 aa16.22■□□□□ 0.19
CRTC3-213ENST00000561255 BTBD11A6QL63 1104 aa16.22■□□□□ 0.19
CRTC3-213ENST00000561255 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
CRTC3-213ENST00000561255 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
CRTC3-213ENST00000561255 KCNQ3O43525 872 aa16.21■□□□□ 0.19
CRTC3-213ENST00000561255 GPR101Q96P66 508 aaPredicted RBP16.21■□□□□ 0.19
CRTC3-213ENST00000561255 NIP7Q9Y221 180 aaKnown RBP eCLIP16.21■□□□□ 0.19
CRTC3-213ENST00000561255 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
CRTC3-213ENST00000561255 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
CRTC3-213ENST00000561255 LTBP1Q14766 1721 aa16.2■□□□□ 0.18
CRTC3-213ENST00000561255 LMOD1P29536 600 aaPredicted RBP16.2■□□□□ 0.18
CRTC3-213ENST00000561255 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
CRTC3-213ENST00000561255 EIF6P56537 245 aaKnown RBP16.2■□□□□ 0.18
CRTC3-213ENST00000561255 CC2D2BQ6DHV5 1058 aa16.2■□□□□ 0.18
CRTC3-213ENST00000561255 MAP2K2P36507 400 aa16.19■□□□□ 0.18
CRTC3-213ENST00000561255 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
CRTC3-213ENST00000561255 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
CRTC3-213ENST00000561255 COL4A5P29400 1685 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
CRTC3-213ENST00000561255 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
CRTC3-213ENST00000561255 SCNN1DP51172 638 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 CST9Q5W186 159 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-213ENST00000561255 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
CRTC3-213ENST00000561255 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
CRTC3-213ENST00000561255 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
CRTC3-213ENST00000561255 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
CRTC3-213ENST00000561255 CA12O43570 354 aa16.17■□□□□ 0.18
CRTC3-213ENST00000561255 EPS15P42566 896 aa16.17■□□□□ 0.18
CRTC3-213ENST00000561255 FMR1Q06787 632 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms