RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	SETDB2	Q96T68	719 aa		33.3	■■■□□ 2.92
TCF12-222	ENST00000561152	CHPF2	Q9P2E5	772 aa		33.3	■■■□□ 2.92
TCF12-222	ENST00000561152	CARMIL3	Q8ND23	1372 aa		33.3	■■■□□ 2.92
TCF12-222	ENST00000561152	ZNF521	Q96K83	1311 aa		33.29	■■■□□ 2.92
TCF12-222	ENST00000561152	C10orf71	Q711Q0	1435 aa		33.29	■■■□□ 2.92
TCF12-222	ENST00000561152	GOLGA2	Q08379	1002 aa		33.29	■■■□□ 2.92
TCF12-222	ENST00000561152	SERPINB2	P05120	415 aa		33.28	■■■□□ 2.92
TCF12-222	ENST00000561152	PROSER3	Q2NL68	480 aa		33.28	■■■□□ 2.92
TCF12-222	ENST00000561152	LRP10	Q7Z4F1	713 aa		33.28	■■■□□ 2.92
TCF12-222	ENST00000561152	NLGN2	Q8NFZ4	835 aa		33.28	■■■□□ 2.92
TCF12-222	ENST00000561152	ANXA1	P04083	346 aa		33.27	■■■□□ 2.92
TCF12-222	ENST00000561152	TTLL7	Q6ZT98	887 aa		33.27	■■■□□ 2.92
TCF12-222	ENST00000561152	AFDN	P55196	1824 aa	Known RBP	33.27	■■■□□ 2.92
TCF12-222	ENST00000561152	NRXN2	Q9P2S2	1712 aa		33.27	■■■□□ 2.92
TCF12-222	ENST00000561152	CCDC30	Q5VVM6	783 aa		33.26	■■■□□ 2.91
TCF12-222	ENST00000561152	HYPK	Q9NX55	129 aa		33.26	■■■□□ 2.91
TCF12-222	ENST00000561152	TGFB2	P61812	414 aa		33.25	■■■□□ 2.91
TCF12-222	ENST00000561152	TWISTNB	Q3B726	338 aa	Predicted RBP	33.25	■■■□□ 2.91
TCF12-222	ENST00000561152	NUP98	P52948	1817 aa		33.24	■■■□□ 2.91
TCF12-222	ENST00000561152	HLF	Q16534	295 aa		33.24	■■■□□ 2.91
TCF12-222	ENST00000561152	TSPYL6	Q8N831	410 aa		33.24	■■■□□ 2.91
TCF12-222	ENST00000561152	ZBTB3	Q9H5J0	574 aa		33.24	■■■□□ 2.91
TCF12-222	ENST00000561152	COPS6	Q7L5N1	327 aa		33.23	■■■□□ 2.91
TCF12-222	ENST00000561152	XAGE3	Q8WTP9	111 aa		33.23	■■■□□ 2.91
TCF12-222	ENST00000561152	NIP7	Q9Y221	180 aa	Known RBP eCLIP	33.23	■■■□□ 2.91
TCF12-222	ENST00000561152	AIMP1	Q12904	312 aa	Known RBP	33.22	■■■□□ 2.91
TCF12-222	ENST00000561152	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.22	■■■□□ 2.91
TCF12-222	ENST00000561152	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.21	■■■□□ 2.91
TCF12-222	ENST00000561152	ATP10D	Q9P241	1426 aa		33.2	■■■□□ 2.91
TCF12-222	ENST00000561152	NPHP1	O15259	732 aa		33.2	■■■□□ 2.91
TCF12-222	ENST00000561152	STK31	Q9BXU1	1019 aa		33.19	■■■□□ 2.9
TCF12-222	ENST00000561152		E9PSI1	815 aa		33.18	■■■□□ 2.9
TCF12-222	ENST00000561152	EXOSC9	Q06265	439 aa	Known RBP	33.18	■■■□□ 2.9
TCF12-222	ENST00000561152	CNBD1	Q8NA66	436 aa		33.18	■■■□□ 2.9
TCF12-222	ENST00000561152	NBPF5P	Q86XG9	351 aa	Predicted RBP	33.17	■■■□□ 2.9
TCF12-222	ENST00000561152	PXDNL	A1KZ92	1463 aa		33.17	■■■□□ 2.9
TCF12-222	ENST00000561152	ST5	P78524	1137 aa		33.16	■■■□□ 2.9
TCF12-222	ENST00000561152	GPR162	Q16538	588 aa		33.16	■■■□□ 2.9
TCF12-222	ENST00000561152	HSP90AB3P	Q58FF7	597 aa		33.16	■■■□□ 2.9
TCF12-222	ENST00000561152	PRR5L	Q6MZQ0	368 aa		33.15	■■■□□ 2.9
TCF12-222	ENST00000561152	TPTE2	Q6XPS3	522 aa		33.15	■■■□□ 2.9
TCF12-222	ENST00000561152	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.15	■■■□□ 2.9
TCF12-222	ENST00000561152	KIAA1551	Q9HCM1	1747 aa		33.15	■■■□□ 2.9
TCF12-222	ENST00000561152	PELP1	Q8IZL8	1130 aa	Known RBP	33.14	■■■□□ 2.9
TCF12-222	ENST00000561152	PLBD2	Q8NHP8	589 aa		33.14	■■■□□ 2.9
TCF12-222	ENST00000561152	ANKRD13D	Q6ZTN6	518 aa		33.13	■■■□□ 2.89
TCF12-222	ENST00000561152	NYX	Q9GZU5	481 aa		33.13	■■■□□ 2.89
TCF12-222	ENST00000561152		A0A0G2JLW4	131 aa		33.12	■■■□□ 2.89
TCF12-222	ENST00000561152	VAMP4	O75379	141 aa		33.12	■■■□□ 2.89
TCF12-222	ENST00000561152	ZNF34	Q8IZ26	560 aa		33.12	■■■□□ 2.89
TCF12-222	ENST00000561152	BRIP1	Q9BX63	1249 aa		33.12	■■■□□ 2.89
TCF12-222	ENST00000561152	DPEP1	P16444	411 aa		33.11	■■■□□ 2.89
TCF12-222	ENST00000561152	PARP10	Q53GL7	1025 aa		33.11	■■■□□ 2.89
TCF12-222	ENST00000561152	PDZRN3	Q9UPQ7	1066 aa		33.11	■■■□□ 2.89
TCF12-222	ENST00000561152	ANKRD36C	Q5JPF3	1778 aa		33.11	■■■□□ 2.89
TCF12-222	ENST00000561152	DDX58	O95786	925 aa	Known RBP	33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	GPT	P24298	496 aa		33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	GTF2E1	P29083	439 aa	Predicted RBP	33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	PDE6B	P35913	854 aa		33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	SLFN5	Q08AF3	891 aa		33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	PHAX	Q9H814	394 aa	Known RBP	33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	CACNA1F	O60840	1977 aa		33.1	■■■□□ 2.89
TCF12-222	ENST00000561152	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.09	■■■□□ 2.89
TCF12-222	ENST00000561152	FAM177B	A6PVY3	158 aa		33.08	■■■□□ 2.89
TCF12-222	ENST00000561152	TCIRG1	Q13488	830 aa		33.08	■■■□□ 2.89
TCF12-222	ENST00000561152	PPP1R42	Q7Z4L9	355 aa		33.08	■■■□□ 2.89
TCF12-222	ENST00000561152	RIC3	Q7Z5B4	369 aa		33.07	■■■□□ 2.88
TCF12-222	ENST00000561152	UBN2	Q6ZU65	1347 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152	ANKRD31	Q8N7Z5	1873 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152	GRIN3B	O60391	1043 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152	SLC4A2	P04920	1241 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152	PIM2	Q9P1W9	311 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152	ARFGEF2	Q9Y6D5	1785 aa		33.06	■■■□□ 2.88
TCF12-222	ENST00000561152		H0YIN7	160 aa		33.05	■■■□□ 2.88
TCF12-222	ENST00000561152	TCERG1	O14776	1098 aa	Known RBP	33.05	■■■□□ 2.88
TCF12-222	ENST00000561152	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
TCF12-222	ENST00000561152	CCDC24	Q8N4L8	307 aa		33.05	■■■□□ 2.88
TCF12-222	ENST00000561152	BRCA1	P38398	1863 aa	Known RBP	33.05	■■■□□ 2.88
TCF12-222	ENST00000561152	CHRNA5	P30532	468 aa		33.04	■■■□□ 2.88
TCF12-222	ENST00000561152	C2CD5	Q86YS7	1000 aa		33.04	■■■□□ 2.88
TCF12-222	ENST00000561152	DLEC1	Q9Y238	1755 aa		33.04	■■■□□ 2.88
TCF12-222	ENST00000561152	YBX3	P16989	372 aa	Known RBP eCLIP	33.03	■■■□□ 2.88	7e-8	■□□□□ 9.3
TCF12-222	ENST00000561152	KCNA3	P22001	575 aa		33.03	■■■□□ 2.88
TCF12-222	ENST00000561152	SUSD4	Q5VX71	490 aa		33.03	■■■□□ 2.88
TCF12-222	ENST00000561152	CDCA7L	Q96GN5	454 aa		33.03	■■■□□ 2.88
TCF12-222	ENST00000561152	WWC3	Q9ULE0	1092 aa		33.02	■■■□□ 2.88
TCF12-222	ENST00000561152	RNF123	Q5XPI4	1314 aa		33.02	■■■□□ 2.88
TCF12-222	ENST00000561152	UTP14A	Q9BVJ6	771 aa	Known RBP	33.01	■■■□□ 2.87
TCF12-222	ENST00000561152	BCS1L	Q9Y276	419 aa		33.01	■■■□□ 2.87
TCF12-222	ENST00000561152	NLRP10	Q86W26	655 aa		33	■■■□□ 2.87
TCF12-222	ENST00000561152	TRMT2A	Q8IZ69	625 aa	Known RBP	33	■■■□□ 2.87
TCF12-222	ENST00000561152	NTSR2	O95665	410 aa		32.99	■■■□□ 2.87
TCF12-222	ENST00000561152	DALRD3	Q5D0E6	543 aa	Known RBP	32.99	■■■□□ 2.87
TCF12-222	ENST00000561152	KSR2	Q6VAB6	950 aa		32.99	■■■□□ 2.87
TCF12-222	ENST00000561152	FLII	Q13045	1269 aa		32.98	■■■□□ 2.87
TCF12-222	ENST00000561152	NUTM1	Q86Y26	1132 aa		32.98	■■■□□ 2.87
TCF12-222	ENST00000561152	ISCA1	Q9BUE6	129 aa		32.98	■■■□□ 2.87
TCF12-222	ENST00000561152	RIC1	Q4ADV7	1423 aa		32.97	■■■□□ 2.87
TCF12-222	ENST00000561152	ERFE	Q4G0M1	354 aa		32.97	■■■□□ 2.87
TCF12-222	ENST00000561152	ZNF428	Q96B54	188 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms