RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 C9orf131Q5VYM1 1079 aa14.82□□□□□ -0.04
GABPB1-210ENST00000560825 C2CD5Q86YS7 1000 aa14.82□□□□□ -0.04
GABPB1-210ENST00000560825 GPBP1L1Q9HC44 474 aaPredicted RBP14.82□□□□□ -0.04
GABPB1-210ENST00000560825 DICER1Q9UPY3 1922 aaKnown RBP14.82□□□□□ -0.04
GABPB1-210ENST00000560825 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
GABPB1-210ENST00000560825 SLC51AQ86UW1 340 aa14.81□□□□□ -0.04
GABPB1-210ENST00000560825 NGEFQ8N5V2 710 aa14.81□□□□□ -0.04
GABPB1-210ENST00000560825 TMPOP42166 694 aaKnown RBP14.8□□□□□ -0.04
GABPB1-210ENST00000560825 RIPK4P57078 832 aa14.8□□□□□ -0.04
GABPB1-210ENST00000560825 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
GABPB1-210ENST00000560825 CCDC184Q52MB2 194 aa14.8□□□□□ -0.04
GABPB1-210ENST00000560825 TTLL7Q6ZT98 887 aa14.8□□□□□ -0.04
GABPB1-210ENST00000560825 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
GABPB1-210ENST00000560825 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
GABPB1-210ENST00000560825 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 FAM177BA6PVY3 158 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 NFKBIEO00221 500 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 NEUROD2Q15784 382 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 PRKRIP1Q9H875 184 aaPredicted RBP14.79□□□□□ -0.04
GABPB1-210ENST00000560825 ADAMTS8Q9UP79 889 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 LAMB2P55268 1798 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 ANKRD36CQ5JPF3 1778 aa14.79□□□□□ -0.04
GABPB1-210ENST00000560825 ANXA1P04083 346 aa14.78□□□□□ -0.04
GABPB1-210ENST00000560825 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
GABPB1-210ENST00000560825 SETDB2Q96T68 719 aa14.78□□□□□ -0.04
GABPB1-210ENST00000560825 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
GABPB1-210ENST00000560825 MYL6BP14649 208 aa14.77□□□□□ -0.04
GABPB1-210ENST00000560825 PDIA6Q15084 440 aa14.77□□□□□ -0.04
GABPB1-210ENST00000560825 OLFM4Q6UX06 510 aa14.77□□□□□ -0.04
GABPB1-210ENST00000560825 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.04
GABPB1-210ENST00000560825 TTLL6Q8N841 843 aa14.77□□□□□ -0.04
GABPB1-210ENST00000560825 TAF1P21675 1872 aa14.77□□□□□ -0.05
GABPB1-210ENST00000560825 H0YIN7 160 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
GABPB1-210ENST00000560825 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 ZNF622Q969S3 477 aaKnown RBP eCLIP14.76□□□□□ -0.055e-7■■□□□ 11.6
GABPB1-210ENST00000560825 BRIP1Q9BX63 1249 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 PCNTO95613 3336 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 UBN2Q6ZU65 1347 aa14.76□□□□□ -0.05
GABPB1-210ENST00000560825 C21orf2O43822 256 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 NEFMP07197 916 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 SRGNP10124 158 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 ZBTB3Q9H5J0 574 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 TSPYL4Q9UJ04 414 aa14.75□□□□□ -0.05
GABPB1-210ENST00000560825 NIP7Q9Y221 180 aaKnown RBP eCLIP14.75□□□□□ -0.05
GABPB1-210ENST00000560825 CLEC4GQ6UXB4 293 aa14.74□□□□□ -0.05
GABPB1-210ENST00000560825 NBPF5PQ86XG9 351 aaPredicted RBP14.74□□□□□ -0.05
GABPB1-210ENST00000560825 NUTM1Q86Y26 1132 aa14.74□□□□□ -0.05
GABPB1-210ENST00000560825 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
GABPB1-210ENST00000560825 EIF2S2P20042 333 aaKnown RBP14.73□□□□□ -0.05
GABPB1-210ENST00000560825 GPTP24298 496 aa14.73□□□□□ -0.05
GABPB1-210ENST00000560825 PDE6BP35913 854 aa14.73□□□□□ -0.05
GABPB1-210ENST00000560825 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
GABPB1-210ENST00000560825 PNISRQ8TF01 805 aaKnown RBP14.73□□□□□ -0.05
GABPB1-210ENST00000560825 COL4A1P02462 1669 aa14.72□□□□□ -0.05
GABPB1-210ENST00000560825 PRPF40BQ6NWY9 871 aaKnown RBP14.72□□□□□ -0.05
GABPB1-210ENST00000560825 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
GABPB1-210ENST00000560825 COL4A5P29400 1685 aa14.72□□□□□ -0.05
GABPB1-210ENST00000560825 DDX60Q8IY21 1712 aaKnown RBP14.71□□□□□ -0.05
GABPB1-210ENST00000560825 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
GABPB1-210ENST00000560825 KLRG2A4D1S0 409 aaPredicted RBP14.71□□□□□ -0.05
GABPB1-210ENST00000560825 ERFEQ4G0M1 354 aa14.71□□□□□ -0.05
GABPB1-210ENST00000560825 NPM2Q86SE8 214 aaKnown RBP14.71□□□□□ -0.05
GABPB1-210ENST00000560825 C7orf43Q8WVR3 580 aa14.71□□□□□ -0.05
GABPB1-210ENST00000560825 PNNQ9H307 717 aaKnown RBP14.71□□□□□ -0.05
GABPB1-210ENST00000560825 RRAGCQ9HB90 399 aa14.71□□□□□ -0.05
GABPB1-210ENST00000560825 LAS1LQ9Y4W2 734 aaKnown RBP14.71□□□□□ -0.05
GABPB1-210ENST00000560825 WDR90Q96KV7 1748 aa14.71□□□□□ -0.05
GABPB1-210ENST00000560825 CHL1O00533 1208 aa14.7□□□□□ -0.06
GABPB1-210ENST00000560825 ST5P78524 1137 aa14.7□□□□□ -0.06
GABPB1-210ENST00000560825 SUSD4Q5VX71 490 aa14.7□□□□□ -0.06
GABPB1-210ENST00000560825 SNED1Q8TER0 1413 aa14.7□□□□□ -0.06
GABPB1-210ENST00000560825 POTECB2RU33 542 aa14.69□□□□□ -0.06
GABPB1-210ENST00000560825 LMNB1P20700 586 aa14.69□□□□□ -0.06
GABPB1-210ENST00000560825 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
GABPB1-210ENST00000560825 STYK1Q6J9G0 422 aa14.69□□□□□ -0.06
GABPB1-210ENST00000560825 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
GABPB1-210ENST00000560825 ZNF652Q9Y2D9 606 aa14.69□□□□□ -0.06
GABPB1-210ENST00000560825 APAF1O14727 1248 aa14.68□□□□□ -0.06
GABPB1-210ENST00000560825 NPHP1O15259 732 aa14.68□□□□□ -0.06
GABPB1-210ENST00000560825 HTRA3P83110 453 aa14.68□□□□□ -0.06
GABPB1-210ENST00000560825 ZNF34Q8IZ26 560 aa14.68□□□□□ -0.06
GABPB1-210ENST00000560825 MASTLQ96GX5 879 aa14.68□□□□□ -0.06
GABPB1-210ENST00000560825 ERVV-1B6SEH8 477 aa14.67□□□□□ -0.06
GABPB1-210ENST00000560825 NTSR2O95665 410 aa14.67□□□□□ -0.06
GABPB1-210ENST00000560825 HSPA6P17066 643 aa14.67□□□□□ -0.06
GABPB1-210ENST00000560825 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
GABPB1-210ENST00000560825 TPTE2Q6XPS3 522 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 GIGYF2Q6Y7W6 1299 aaKnown RBP14.66□□□□□ -0.06
GABPB1-210ENST00000560825 KIF6Q6ZMV9 814 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 MBIPQ9NS73 344 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 CHPF2Q9P2E5 772 aa14.66□□□□□ -0.06
GABPB1-210ENST00000560825 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
GABPB1-210ENST00000560825 GLTPD2A6NH11 291 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 RGL2O15211 777 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms