RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 FER1L6Q2WGJ9 1857 aa16.15■□□□□ 0.18
MARK3-221ENST00000560603 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
MARK3-221ENST00000560603 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
MARK3-221ENST00000560603 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
MARK3-221ENST00000560603 CEMIPQ8WUJ3 1361 aa16.14■□□□□ 0.17
MARK3-221ENST00000560603 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
MARK3-221ENST00000560603 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
MARK3-221ENST00000560603 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
MARK3-221ENST00000560603 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
MARK3-221ENST00000560603 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
MARK3-221ENST00000560603 DDNO94850 711 aaPredicted RBP16.13■□□□□ 0.17
MARK3-221ENST00000560603 CCDC93Q567U6 631 aa16.13■□□□□ 0.17
MARK3-221ENST00000560603 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
MARK3-221ENST00000560603 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
MARK3-221ENST00000560603 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
MARK3-221ENST00000560603 COL11A2P13942 1736 aaPredicted RBP16.12■□□□□ 0.17
MARK3-221ENST00000560603 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
MARK3-221ENST00000560603 NPR1P16066 1061 aa16.11■□□□□ 0.17
MARK3-221ENST00000560603 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
MARK3-221ENST00000560603 TPTE2Q6XPS3 522 aa16.11■□□□□ 0.17
MARK3-221ENST00000560603 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
MARK3-221ENST00000560603 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
MARK3-221ENST00000560603 RGL2O15211 777 aa16.1■□□□□ 0.17
MARK3-221ENST00000560603 KCNQ3O43525 872 aa16.1■□□□□ 0.17
MARK3-221ENST00000560603 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
MARK3-221ENST00000560603 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
MARK3-221ENST00000560603 MKRN1Q9UHC7 482 aaKnown RBP16.1■□□□□ 0.17
MARK3-221ENST00000560603 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
MARK3-221ENST00000560603 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
MARK3-221ENST00000560603 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
MARK3-221ENST00000560603 BCORQ6W2J9 1755 aa16.08■□□□□ 0.17
MARK3-221ENST00000560603 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.17
MARK3-221ENST00000560603 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
MARK3-221ENST00000560603 C7orf43Q8WVR3 580 aa16.08■□□□□ 0.16
MARK3-221ENST00000560603 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
MARK3-221ENST00000560603 NIP7Q9Y221 180 aaKnown RBP eCLIP16.08■□□□□ 0.16
MARK3-221ENST00000560603 KLRG2A4D1S0 409 aaPredicted RBP16.07■□□□□ 0.16
MARK3-221ENST00000560603 POTEIP0CG38 1075 aa16.07■□□□□ 0.16
MARK3-221ENST00000560603 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
MARK3-221ENST00000560603 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
MARK3-221ENST00000560603 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
MARK3-221ENST00000560603 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
MARK3-221ENST00000560603 PIP4K2AP48426 406 aaPredicted RBP16.07■□□□□ 0.16
MARK3-221ENST00000560603 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
MARK3-221ENST00000560603 SCN4AP35499 1836 aa16.07■□□□□ 0.16
MARK3-221ENST00000560603 CACNA1SQ13698 1873 aa16.07■□□□□ 0.16
MARK3-221ENST00000560603 CNTNAP1P78357 1384 aa16.06■□□□□ 0.16
MARK3-221ENST00000560603 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
MARK3-221ENST00000560603 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
MARK3-221ENST00000560603 HACL1Q9UJ83 578 aa16.06■□□□□ 0.16
MARK3-221ENST00000560603 PASKQ96RG2 1323 aa16.05■□□□□ 0.16
MARK3-221ENST00000560603 TMEM88BA6NKF7 163 aa16.05■□□□□ 0.16
MARK3-221ENST00000560603 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
MARK3-221ENST00000560603 MCM10Q7L590 875 aa16.05■□□□□ 0.16
MARK3-221ENST00000560603 PNMA8AQ86V59 439 aaPredicted RBP16.05■□□□□ 0.16
MARK3-221ENST00000560603 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
MARK3-221ENST00000560603 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
MARK3-221ENST00000560603 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
MARK3-221ENST00000560603 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 NEFMP07197 916 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 EPHX2P34913 555 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
MARK3-221ENST00000560603 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
MARK3-221ENST00000560603 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.16
MARK3-221ENST00000560603 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
MARK3-221ENST00000560603 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
MARK3-221ENST00000560603 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
MARK3-221ENST00000560603 CC2D2BQ6DHV5 1058 aa16.02■□□□□ 0.16
MARK3-221ENST00000560603 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
MARK3-221ENST00000560603 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
MARK3-221ENST00000560603 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
MARK3-221ENST00000560603 FOXN1O15353 648 aa16.01■□□□□ 0.15
MARK3-221ENST00000560603 ITGBL1O95965 494 aaPredicted RBP16.01■□□□□ 0.15
MARK3-221ENST00000560603 GPC2Q8N158 579 aa16.01■□□□□ 0.15
MARK3-221ENST00000560603 FZD9O00144 591 aa16■□□□□ 0.15
MARK3-221ENST00000560603 VEGFBP49765 207 aa16■□□□□ 0.15
MARK3-221ENST00000560603 DCTN1Q14203 1278 aa16■□□□□ 0.15
MARK3-221ENST00000560603 GRIPAP1Q4V328 841 aa16■□□□□ 0.15
MARK3-221ENST00000560603 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
MARK3-221ENST00000560603 PSMD1Q99460 953 aa16■□□□□ 0.15
MARK3-221ENST00000560603 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
MARK3-221ENST00000560603 PPP2R1AP30153 589 aa15.99■□□□□ 0.15
MARK3-221ENST00000560603 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
MARK3-221ENST00000560603 HLFQ16534 295 aa15.99■□□□□ 0.15
MARK3-221ENST00000560603 OLFM4Q6UX06 510 aa15.99■□□□□ 0.15
MARK3-221ENST00000560603 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
MARK3-221ENST00000560603 RPGRQ92834 1020 aaKnown RBP15.99■□□□□ 0.15
MARK3-221ENST00000560603 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
MARK3-221ENST00000560603 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
MARK3-221ENST00000560603 CRY2Q49AN0 593 aa15.98■□□□□ 0.15
MARK3-221ENST00000560603 KIF6Q6ZMV9 814 aa15.98■□□□□ 0.15
MARK3-221ENST00000560603 DEFB115Q30KQ5 88 aa15.97■□□□□ 0.15
MARK3-221ENST00000560603 NGEFQ8N5V2 710 aa15.97■□□□□ 0.15
MARK3-221ENST00000560603 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
MARK3-221ENST00000560603 WBP1LQ9NX94 342 aa15.97■□□□□ 0.15
MARK3-221ENST00000560603 MAP3K15Q6ZN16 1313 aa15.96■□□□□ 0.15
MARK3-221ENST00000560603 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
MARK3-221ENST00000560603 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms