RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 GPC6Q9Y625 555 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-218ENST00000560236 ELOA3CA0A087WX78 387 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-218ENST00000560236 USP17L3A6NCW0 530 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 USP17L4A6NCW7 530 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 ELOA3DA6NLF2 546 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-218ENST00000560236 FLIIQ13045 1269 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 ELOA3BQ3SY89 546 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 CCDC102BQ68D86 513 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 USP17L2Q6R6M4 530 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 USP17L1Q7RTZ2 530 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 PLEKHM2Q8IWE5 1019 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 ELOA3Q8NG57 546 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 KIAA1024Q9UPX6 916 aa7.85□□□□□ -1.15
LRRC28-218ENST00000560236 ZBTB7BO15156 539 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-218ENST00000560236 CHRNA4P43681 627 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 CLDN10P78369 228 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 SH3PXD2AQ5TCZ1 1133 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 RHPN1Q8TCX5 695 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 ADAMTS19Q8TE59 1207 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 TRIM11Q96F44 468 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 PLVAPQ9BX97 442 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 CHMP3Q9Y3E7 222 aa7.84□□□□□ -1.15
LRRC28-218ENST00000560236 SIN3BO75182 1162 aa7.83□□□□□ -1.16
LRRC28-218ENST00000560236 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
LRRC28-218ENST00000560236 SFSWAPQ12872 951 aaKnown RBP7.82□□□□□ -1.16
LRRC28-218ENST00000560236 OGFOD1Q8N543 542 aa7.82□□□□□ -1.16
LRRC28-218ENST00000560236 UCN2Q96RP3 112 aa7.82□□□□□ -1.16
LRRC28-218ENST00000560236 TSPAN10Q9H1Z9 355 aaPredicted RBP7.82□□□□□ -1.16
LRRC28-218ENST00000560236 PALM3A6NDB9 673 aaPredicted RBP7.81□□□□□ -1.16
LRRC28-218ENST00000560236 ATP9BO43861 1147 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 NEUROD1Q13562 356 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 SLC30A3Q99726 388 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 ANKIB1Q9P2G1 1089 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
LRRC28-218ENST00000560236 SPDYE3A6NKU9 549 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 SPATA31C1P0DKV0 1188 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 SPEM2Q0P670 501 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 XP32Q5T750 250 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 MDFIQ99750 246 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
LRRC28-218ENST00000560236 MKRN1Q9UHC7 482 aaKnown RBP7.8□□□□□ -1.16
LRRC28-218ENST00000560236 RBM19Q9Y4C8 960 aaKnown RBP7.8□□□□□ -1.16
LRRC28-218ENST00000560236 M0R2N6 131 aa7.79□□□□□ -1.16
LRRC28-218ENST00000560236 HIRAP54198 1017 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-218ENST00000560236 TSEN2Q8NCE0 465 aaKnown RBP7.79□□□□□ -1.16
LRRC28-218ENST00000560236 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
LRRC28-218ENST00000560236 HSH2DQ96JZ2 352 aa7.79□□□□□ -1.16
LRRC28-218ENST00000560236 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
LRRC28-218ENST00000560236 SFI1A8K8P3 1242 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 M0R082 166 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 DOC2BQ14184 412 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 PRRT3Q5FWE3 981 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 SIX5Q8N196 739 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 ZNF417Q8TAU3 575 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 TNFRSF25Q93038 417 aa7.78□□□□□ -1.16
LRRC28-218ENST00000560236 ZNF587Q96SQ5 575 aaPredicted RBP7.78□□□□□ -1.16
LRRC28-218ENST00000560236 PPP1R12BO60237 982 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-218ENST00000560236 GATA4P43694 442 aa7.77□□□□□ -1.17
LRRC28-218ENST00000560236 POTEAQ6S8J7 498 aa7.77□□□□□ -1.17
LRRC28-218ENST00000560236 RAB44Q7Z6P3 723 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-218ENST00000560236 SUSD3Q96L08 255 aa7.77□□□□□ -1.17
LRRC28-218ENST00000560236 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
LRRC28-218ENST00000560236 ADH7P40394 386 aa7.76□□□□□ -1.17
LRRC28-218ENST00000560236 ZNF280CQ8ND82 737 aa7.76□□□□□ -1.17
LRRC28-218ENST00000560236 STARD13Q9Y3M8 1113 aa7.76□□□□□ -1.17
LRRC28-218ENST00000560236 APBA3O96018 575 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 ALBP02768 609 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 KCNQ4P56696 695 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 TYRO3Q06418 890 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 SEMA6BQ9H3T3 888 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 PRDM6Q9NQX0 595 aa7.75□□□□□ -1.17
LRRC28-218ENST00000560236 C21orf2O43822 256 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 DKK1O94907 266 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 RASA1P20936 1047 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 ALDH16A1Q8IZ83 802 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 Q8N3U1 123 aa7.74□□□□□ -1.17
LRRC28-218ENST00000560236 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 SEC13P55735 322 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 TRIM28Q13263 835 aaKnown RBP7.73□□□□□ -1.17
LRRC28-218ENST00000560236 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-218ENST00000560236 HIF1AQ16665 826 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-218ENST00000560236 SCG3Q8WXD2 468 aaKnown RBP7.73□□□□□ -1.17
LRRC28-218ENST00000560236 GLMNQ92990 594 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 BHMTQ93088 406 aa7.73□□□□□ -1.17
LRRC28-218ENST00000560236 TFIP11Q9UBB9 837 aaKnown RBP7.73□□□□□ -1.17
LRRC28-218ENST00000560236 BTLAQ7Z6A9 289 aa7.72□□□□□ -1.17
LRRC28-218ENST00000560236 STAG2Q8N3U4 1231 aa7.72□□□□□ -1.17
LRRC28-218ENST00000560236 GAS2L2Q8NHY3 880 aa7.72□□□□□ -1.17
LRRC28-218ENST00000560236 NGLY1Q96IV0 654 aa7.72□□□□□ -1.17
LRRC28-218ENST00000560236 C2orf49Q9BVC5 232 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms