RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 NUP98P52948 1817 aa13.24□□□□□ -0.29
TPM1-221ENST00000559831 ADCY9O60503 1353 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 EZH2Q15910 746 aaKnown RBP13.23□□□□□ -0.29
TPM1-221ENST00000559831 RC3H1Q5TC82 1133 aaKnown RBP13.23□□□□□ -0.29
TPM1-221ENST00000559831 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 PROM2Q8N271 834 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 EP400Q96L91 3159 aa13.23□□□□□ -0.29
TPM1-221ENST00000559831 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 C4AP0C0L4 1744 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 COL15A1P39059 1388 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 EIF5P55010 431 aaKnown RBP13.22□□□□□ -0.29
TPM1-221ENST00000559831 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
TPM1-221ENST00000559831 RPS6KA4O75676 772 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 PHF14O94880 888 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
TPM1-221ENST00000559831 MVPQ14764 893 aaKnown RBP13.21□□□□□ -0.29
TPM1-221ENST00000559831 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 DEFB132Q7Z7B7 95 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
TPM1-221ENST00000559831 PLBD2Q8NHP8 589 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 TBC1D2BQ9UPU7 963 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
TPM1-221ENST00000559831 GTF3C3Q9Y5Q9 886 aa13.21□□□□□ -0.29
TPM1-221ENST00000559831 A0A087WZG4 1122 aa13.2□□□□□ -0.3
TPM1-221ENST00000559831 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
TPM1-221ENST00000559831 MYD88Q99836 296 aa13.2□□□□□ -0.3
TPM1-221ENST00000559831 SCN7AQ01118 1682 aa13.2□□□□□ -0.3
TPM1-221ENST00000559831 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
TPM1-221ENST00000559831 NEXNQ0ZGT2 675 aa13.19□□□□□ -0.3
TPM1-221ENST00000559831 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
TPM1-221ENST00000559831 CCDC125Q86Z20 511 aa13.19□□□□□ -0.3
TPM1-221ENST00000559831 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
TPM1-221ENST00000559831 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
TPM1-221ENST00000559831 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
TPM1-221ENST00000559831 ZNF827Q17R98 1081 aa13.18□□□□□ -0.3
TPM1-221ENST00000559831 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
TPM1-221ENST00000559831 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
TPM1-221ENST00000559831 ATP5J2-PTCD1G3V325 749 aa13.17□□□□□ -0.3
TPM1-221ENST00000559831 HLFQ16534 295 aa13.17□□□□□ -0.3
TPM1-221ENST00000559831 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
TPM1-221ENST00000559831 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
TPM1-221ENST00000559831 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
TPM1-221ENST00000559831 TFCP2L1Q9NZI6 479 aa13.17□□□□□ -0.3
TPM1-221ENST00000559831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
TPM1-221ENST00000559831 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 ZPR1O75312 459 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 RFC4P35249 363 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
TPM1-221ENST00000559831 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM1-221ENST00000559831 AKT1S1Q96B36 256 aa13.16□□□□□ -0.3
TPM1-221ENST00000559831 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
TPM1-221ENST00000559831 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 ADRA2BP18089 450 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 GPTP24298 496 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 SSFA2P28290 1259 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 GIGYF2Q6Y7W6 1299 aaKnown RBP13.15□□□□□ -0.3
TPM1-221ENST00000559831 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
TPM1-221ENST00000559831 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
TPM1-221ENST00000559831 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 MSH5O43196 834 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 MEIS3Q99687 375 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
TPM1-221ENST00000559831 ANO8Q9HCE9 1232 aaPredicted RBP13.14□□□□□ -0.31
TPM1-221ENST00000559831 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
TPM1-221ENST00000559831 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
TPM1-221ENST00000559831 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
TPM1-221ENST00000559831 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
TPM1-221ENST00000559831 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
TPM1-221ENST00000559831 GNAI3P08754 354 aa13.12□□□□□ -0.31
TPM1-221ENST00000559831 GCKRQ14397 625 aa13.12□□□□□ -0.31
TPM1-221ENST00000559831 SLC15A2Q16348 729 aa13.12□□□□□ -0.31
TPM1-221ENST00000559831 BICDL1Q6ZP65 573 aa13.12□□□□□ -0.31
TPM1-221ENST00000559831 JARID2Q92833 1246 aaPredicted RBP13.12□□□□□ -0.31
TPM1-221ENST00000559831 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
TPM1-221ENST00000559831 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 GRM8O00222 908 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
TPM1-221ENST00000559831 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
TPM1-221ENST00000559831 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 FLAD1Q8NFF5 587 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 USP44Q9H0E7 712 aa13.11□□□□□ -0.31
TPM1-221ENST00000559831 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms