RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
RABGGTA-209ENST00000559551 NUP98P52948 1817 aa18■□□□□ 0.47
RABGGTA-209ENST00000559551 ATP6V1AP38606 617 aa18■□□□□ 0.47
RABGGTA-209ENST00000559551 STARD3NLO95772 234 aa17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 KCNQ4P56696 695 aa17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 RIC3Q7Z5B4 369 aa17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 NBPF7P0C2Y1 421 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 CEP85Q6P2H3 762 aa17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 KRT27Q7Z3Y8 459 aa17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 SMARCC1Q92922 1105 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 METTL22Q9BUU2 404 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-209ENST00000559551 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
RABGGTA-209ENST00000559551 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
RABGGTA-209ENST00000559551 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 RWDD1Q9H446 243 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 ANKRD36CQ5JPF3 1778 aa17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 ALDH1L1O75891 902 aa17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 MYD88Q99836 296 aa17.97■□□□□ 0.47
RABGGTA-209ENST00000559551 NEURL1BA8MQ27 555 aa17.96■□□□□ 0.47
RABGGTA-209ENST00000559551 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-209ENST00000559551 LINC00116Q8NCU8 138 aa17.96■□□□□ 0.47
RABGGTA-209ENST00000559551 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
RABGGTA-209ENST00000559551 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
RABGGTA-209ENST00000559551 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
RABGGTA-209ENST00000559551 GNAI2P04899 355 aa17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 GNAI3P08754 354 aa17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 IBTKQ9P2D0 1353 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 ATP5J2-PTCD1G3V325 749 aa17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 BCL11BQ9C0K0 894 aaPredicted RBP17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
RABGGTA-209ENST00000559551 UTYO14607 1347 aa17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 UBTFL1P0CB47 393 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 RXRBP28702 533 aa17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 IL6STP40189 918 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 RPAP2Q8IXW5 612 aaPredicted RBP17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
RABGGTA-209ENST00000559551 BCORQ6W2J9 1755 aa17.92■□□□□ 0.46
RABGGTA-209ENST00000559551 GCKRQ14397 625 aa17.92■□□□□ 0.46
RABGGTA-209ENST00000559551 PNMA6EA0A0J9YXQ4 647 aa17.92■□□□□ 0.46
RABGGTA-209ENST00000559551 HLFQ16534 295 aa17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 MAP3K15Q6ZN16 1313 aa17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 GRM8O00222 908 aa17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 TRIM37O94972 964 aa17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 NEXNQ0ZGT2 675 aa17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 JARID2Q92833 1246 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-209ENST00000559551 C4BP0C0L5 1744 aa17.9■□□□□ 0.46
RABGGTA-209ENST00000559551 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-209ENST00000559551 CASP7P55210 303 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 SMIM5Q71RC9 77 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 SUCLG2Q96I99 432 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 DCTPP1Q9H773 170 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 LRRC4BQ9NT99 713 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 C9orf78Q9NZ63 289 aaPredicted RBP17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
RABGGTA-209ENST00000559551 CCNL1Q9UK58 526 aaPredicted RBP17.88■□□□□ 0.45
RABGGTA-209ENST00000559551 CNTNAP4Q9C0A0 1308 aa17.88■□□□□ 0.45
RABGGTA-209ENST00000559551 C4AP0C0L4 1744 aa17.88■□□□□ 0.45
RABGGTA-209ENST00000559551 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 PDE4AP27815 886 aa17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 TCIRG1Q13488 830 aa17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 EPHA10Q5JZY3 1008 aa17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 GIGYF2Q6Y7W6 1299 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
RABGGTA-209ENST00000559551 COL15A1P39059 1388 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 SCN7AQ01118 1682 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 NUCB1Q02818 461 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 SSH3Q8TE77 659 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 RGS3P49796 1198 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 POLA2Q14181 598 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 GCC1Q96CN9 775 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 ARXQ96QS3 562 aa17.86■□□□□ 0.45
RABGGTA-209ENST00000559551 H7C1W4 665 aa17.85■□□□□ 0.45
RABGGTA-209ENST00000559551 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
RABGGTA-209ENST00000559551 MTX1Q13505 466 aa17.85■□□□□ 0.45
RABGGTA-209ENST00000559551 UBE3BQ7Z3V4 1068 aa17.85■□□□□ 0.45
RABGGTA-209ENST00000559551 A0A087WZG4 1122 aa17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 PROM2Q8N271 834 aa17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-209ENST00000559551 UBN2Q6ZU65 1347 aa17.83■□□□□ 0.44
RABGGTA-209ENST00000559551 MYH3P11055 1940 aa17.83■□□□□ 0.44
RABGGTA-209ENST00000559551 GPTP24298 496 aa17.83■□□□□ 0.44
RABGGTA-209ENST00000559551 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms