RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 ADCY9O60503 1353 aa16.2■□□□□ 0.18
CDC42BPB-202ENST00000558321 GTF2E1P29083 439 aaPredicted RBP16.19■□□□□ 0.18
CDC42BPB-202ENST00000558321 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
CDC42BPB-202ENST00000558321 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
CDC42BPB-202ENST00000558321 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
CDC42BPB-202ENST00000558321 RGL2O15211 777 aa16.18■□□□□ 0.18
CDC42BPB-202ENST00000558321 HLFQ16534 295 aa16.18■□□□□ 0.18
CDC42BPB-202ENST00000558321 RNF181Q9P0P0 153 aa16.18■□□□□ 0.18
CDC42BPB-202ENST00000558321 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
CDC42BPB-202ENST00000558321 SCN7AQ01118 1682 aa16.18■□□□□ 0.18
CDC42BPB-202ENST00000558321 NRXN2Q9P2S2 1712 aa16.17■□□□□ 0.18
CDC42BPB-202ENST00000558321 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
CDC42BPB-202ENST00000558321 ERVV-1B6SEH8 477 aa16.17■□□□□ 0.18
CDC42BPB-202ENST00000558321 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
CDC42BPB-202ENST00000558321 KDM3BQ7LBC6 1761 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
CDC42BPB-202ENST00000558321 SENP3-EIF4A1A0A087X0R7 540 aa16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 CHL1O00533 1208 aa16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 C21orf2O43822 256 aa16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 BRCA1P38398 1863 aaKnown RBP16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 STYK1Q6J9G0 422 aa16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 CNKSR1Q969H4 720 aa16.15■□□□□ 0.18
CDC42BPB-202ENST00000558321 APAF1O14727 1248 aa16.14■□□□□ 0.17
CDC42BPB-202ENST00000558321 SRGNP10124 158 aa16.14■□□□□ 0.17
CDC42BPB-202ENST00000558321 RASSF7Q02833 373 aa16.14■□□□□ 0.17
CDC42BPB-202ENST00000558321 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
CDC42BPB-202ENST00000558321 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
CDC42BPB-202ENST00000558321 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
CDC42BPB-202ENST00000558321 LMNB1P20700 586 aa16.13■□□□□ 0.17
CDC42BPB-202ENST00000558321 GPTP24298 496 aa16.13■□□□□ 0.17
CDC42BPB-202ENST00000558321 NPR1P16066 1061 aa16.12■□□□□ 0.17
CDC42BPB-202ENST00000558321 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
CDC42BPB-202ENST00000558321 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
CDC42BPB-202ENST00000558321 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
CDC42BPB-202ENST00000558321 ANP32CO43423 234 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 ANXA1P04083 346 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 PDIA6Q15084 440 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 GIGYF2Q6Y7W6 1299 aaKnown RBP16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 KDM2BQ8NHM5 1336 aa16.11■□□□□ 0.17
CDC42BPB-202ENST00000558321 NFKBIEO00221 500 aa16.1■□□□□ 0.17
CDC42BPB-202ENST00000558321 KIF3CO14782 793 aa16.1■□□□□ 0.17
CDC42BPB-202ENST00000558321 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
CDC42BPB-202ENST00000558321 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
CDC42BPB-202ENST00000558321 NMRK2Q9NPI5 230 aa16.1■□□□□ 0.17
CDC42BPB-202ENST00000558321 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 SUSD4Q5VX71 490 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 PPP1R42Q7Z4L9 355 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 DDX21Q9NR30 783 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 ANKRD31Q8N7Z5 1873 aa16.09■□□□□ 0.17
CDC42BPB-202ENST00000558321 KLRG2A4D1S0 409 aaPredicted RBP16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 ALDH1B1P30837 517 aa16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 PARP10Q53GL7 1025 aa16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
CDC42BPB-202ENST00000558321 PRELPP51888 382 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 GNAI1P63096 354 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 LRP10Q7Z4F1 713 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 MRS2Q9HD23 443 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
CDC42BPB-202ENST00000558321 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 ZC3H4Q9UPT8 1303 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 HOXB7P09629 217 aa16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CDC42BPB-202ENST00000558321 TOMM70O94826 608 aa16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 DPY19L2Q6NUT2 758 aa16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 UTP14AQ9BVJ6 771 aaKnown RBP16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
CDC42BPB-202ENST00000558321 GLTPD2A6NH11 291 aa16.04■□□□□ 0.16
CDC42BPB-202ENST00000558321 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
CDC42BPB-202ENST00000558321 NTSR2O95665 410 aa16.04■□□□□ 0.16
CDC42BPB-202ENST00000558321 C7orf43Q8WVR3 580 aa16.04■□□□□ 0.16
CDC42BPB-202ENST00000558321 COL11A2P13942 1736 aaPredicted RBP16.04■□□□□ 0.16
CDC42BPB-202ENST00000558321 ABCC12Q96J65 1359 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 HSPA6P17066 643 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
CDC42BPB-202ENST00000558321 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms