RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
TPM1-210ENST00000558264 SSFA2P28290 1259 aa12.9□□□□□ -0.34
TPM1-210ENST00000558264 EVA1CP58658 441 aa12.9□□□□□ -0.34
TPM1-210ENST00000558264 NEXNQ0ZGT2 675 aa12.9□□□□□ -0.34
TPM1-210ENST00000558264 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
TPM1-210ENST00000558264 ZGPATQ8N5A5 531 aaKnown RBP12.89□□□□□ -0.35
TPM1-210ENST00000558264 NEK4P51957 841 aa12.89□□□□□ -0.35
TPM1-210ENST00000558264 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
TPM1-210ENST00000558264 AACSQ86V21 672 aa12.89□□□□□ -0.35
TPM1-210ENST00000558264 CLASRPQ8N2M8 674 aaKnown RBP12.89□□□□□ -0.35
TPM1-210ENST00000558264 CCDC8Q9H0W5 538 aaPredicted RBP12.89□□□□□ -0.35
TPM1-210ENST00000558264 COL5A2P05997 1499 aaPredicted RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 MTX1Q13505 466 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 PKP1Q13835 747 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 GCKRQ14397 625 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 UBE3BQ7Z3V4 1068 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 UPF3BQ9BZI7 483 aaKnown RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 TUBGCP6Q96RT7 1819 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 METTL22Q9BUU2 404 aaPredicted RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
TPM1-210ENST00000558264 ZNF330Q9Y3S2 320 aaPredicted RBP12.88□□□□□ -0.35
TPM1-210ENST00000558264 ST18O60284 1047 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 SASH1O94885 1247 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 A1BGP04217 495 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
TPM1-210ENST00000558264 HSP90AB4PQ58FF6 505 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 IL2RBP14784 551 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 RAB3GAP1Q15042 981 aa12.87□□□□□ -0.35
TPM1-210ENST00000558264 AK9Q5TCS8 1911 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 TRAK2O60296 914 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 NBPF14Q5TI25 921 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 TTLL7Q6ZT98 887 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 AOX1Q06278 1338 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
TPM1-210ENST00000558264 FOXD4L5Q5VV16 416 aaPredicted RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 CNTROBQ8N137 903 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 FOXD4L4Q8WXT5 416 aaPredicted RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
TPM1-210ENST00000558264 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 MRC1P22897 1456 aa12.86□□□□□ -0.35
TPM1-210ENST00000558264 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 UTYO14607 1347 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 A0A087WZG4 1122 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 CHAMP1Q96JM3 812 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 MCCP23508 829 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 LARP6Q9BRS8 491 aaKnown RBP12.85□□□□□ -0.35
TPM1-210ENST00000558264 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
TPM1-210ENST00000558264 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
TPM1-210ENST00000558264 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
TPM1-210ENST00000558264 GLRX3O76003 335 aaKnown RBP12.84□□□□□ -0.35
TPM1-210ENST00000558264 CARD10Q9BWT7 1032 aa12.84□□□□□ -0.35
TPM1-210ENST00000558264 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
TPM1-210ENST00000558264 NDUFB9Q9Y6M9 179 aa12.84□□□□□ -0.35
TPM1-210ENST00000558264 SGSM2O43147 1006 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 DTNBO60941 627 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
TPM1-210ENST00000558264 TMX3Q96JJ7 454 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
TPM1-210ENST00000558264 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
TPM1-210ENST00000558264 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 CPA1P15085 419 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 ABCC6O95255 1503 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 TTC41PQ6P2S7 1318 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 GLI3P10071 1580 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
TPM1-210ENST00000558264 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 PLBD2Q8NHP8 589 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 PTH1RQ03431 593 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 TFCP2Q12800 502 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
TPM1-210ENST00000558264 LSG1Q9H089 658 aaKnown RBP12.81□□□□□ -0.36
TPM1-210ENST00000558264 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
TPM1-210ENST00000558264 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
TPM1-210ENST00000558264 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 HSPA4P34932 840 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 KIAA1211Q6ZU35 1233 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 ABCA3Q99758 1704 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 RAD50Q92878 1312 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 A0A0G2JS52 829 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 CHGBP05060 677 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
TPM1-210ENST00000558264 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
TPM1-210ENST00000558264 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
TPM1-210ENST00000558264 MCTP1Q6DN14 999 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms