RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 HSP90AB3PQ58FF7 597 aa17.58■□□□□ 0.4
SHMT2-234ENST00000557703 SRP68Q9UHB9 627 aaKnown RBP17.58■□□□□ 0.4
SHMT2-234ENST00000557703 MMP10P09238 476 aa17.57■□□□□ 0.4
SHMT2-234ENST00000557703 FKBP8Q14318 412 aa17.57■□□□□ 0.4
SHMT2-234ENST00000557703 GIGYF2Q6Y7W6 1299 aaKnown RBP17.57■□□□□ 0.4
SHMT2-234ENST00000557703 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
SHMT2-234ENST00000557703 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
SHMT2-234ENST00000557703 BCL2L12Q9HB09 334 aa17.57■□□□□ 0.4
SHMT2-234ENST00000557703 ANKRD13DQ6ZTN6 518 aa17.56■□□□□ 0.4
SHMT2-234ENST00000557703 COPS6Q7L5N1 327 aa17.56■□□□□ 0.4
SHMT2-234ENST00000557703 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
SHMT2-234ENST00000557703 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
SHMT2-234ENST00000557703 PIP4K2AP48426 406 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-234ENST00000557703 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
SHMT2-234ENST00000557703 CARMIL3Q8ND23 1372 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 NFIXQ14938 502 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 PROSER3Q2NL68 480 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 PARP10Q53GL7 1025 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 MSL1Q68DK7 614 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 SCN7AQ01118 1682 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
SHMT2-234ENST00000557703 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
SHMT2-234ENST00000557703 TTLL7Q6ZT98 887 aa17.53■□□□□ 0.4
SHMT2-234ENST00000557703 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
SHMT2-234ENST00000557703 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
SHMT2-234ENST00000557703 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
SHMT2-234ENST00000557703 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
SHMT2-234ENST00000557703 NYXQ9GZU5 481 aa17.52■□□□□ 0.4
SHMT2-234ENST00000557703 IBTKQ9P2D0 1353 aaPredicted RBP17.52■□□□□ 0.39
SHMT2-234ENST00000557703 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-234ENST00000557703 TGFB2P61812 414 aa17.51■□□□□ 0.39
SHMT2-234ENST00000557703 AIMP1Q12904 312 aaKnown RBP17.51■□□□□ 0.39
SHMT2-234ENST00000557703 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
SHMT2-234ENST00000557703 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
SHMT2-234ENST00000557703 NIP7Q9Y221 180 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHMT2-234ENST00000557703 ANXA1P04083 346 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 SERPINB2P05120 415 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 HLFQ16534 295 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 RIC3Q7Z5B4 369 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 ZBTB3Q9H5J0 574 aa17.5■□□□□ 0.39
SHMT2-234ENST00000557703 DDR1Q08345 913 aa17.49■□□□□ 0.39
SHMT2-234ENST00000557703 FLIIQ13045 1269 aa17.49■□□□□ 0.39
SHMT2-234ENST00000557703 SYT17Q9BSW7 474 aa17.49■□□□□ 0.39
SHMT2-234ENST00000557703 NUP98P52948 1817 aa17.49■□□□□ 0.39
SHMT2-234ENST00000557703 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
SHMT2-234ENST00000557703 PHAXQ9H814 394 aaKnown RBP17.48■□□□□ 0.39
SHMT2-234ENST00000557703 PTPRCP08575 1304 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 ST5P78524 1137 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 NBPF5PQ86XG9 351 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-234ENST00000557703 CNBD1Q8NA66 436 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 FHDC1Q9C0D6 1143 aaPredicted RBP17.47■□□□□ 0.39
SHMT2-234ENST00000557703 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
SHMT2-234ENST00000557703 NPHP1O15259 732 aa17.46■□□□□ 0.39
SHMT2-234ENST00000557703 PDE6BP35913 854 aa17.46■□□□□ 0.39
SHMT2-234ENST00000557703 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
SHMT2-234ENST00000557703 METTL22Q9BUU2 404 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-234ENST00000557703 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
SHMT2-234ENST00000557703 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-234ENST00000557703 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
SHMT2-234ENST00000557703 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
SHMT2-234ENST00000557703 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
SHMT2-234ENST00000557703 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
SHMT2-234ENST00000557703 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
SHMT2-234ENST00000557703 GTF2E1P29083 439 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-234ENST00000557703 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
SHMT2-234ENST00000557703 MRPL50Q8N5N7 158 aaKnown RBP17.44■□□□□ 0.38
SHMT2-234ENST00000557703 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
SHMT2-234ENST00000557703 RIC1Q4ADV7 1423 aa17.44■□□□□ 0.38
SHMT2-234ENST00000557703 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-234ENST00000557703 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
SHMT2-234ENST00000557703 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 DNAAF4Q8WXU2 420 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 MAP3K2Q9Y2U5 619 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
SHMT2-234ENST00000557703 IPO8O15397 1037 aaKnown RBP17.42■□□□□ 0.38
SHMT2-234ENST00000557703 SLC10A5Q5PT55 438 aa17.42■□□□□ 0.38
SHMT2-234ENST00000557703 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
SHMT2-234ENST00000557703 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
SHMT2-234ENST00000557703 GPTP24298 496 aa17.41■□□□□ 0.38
SHMT2-234ENST00000557703 G2E3Q7L622 706 aa17.41■□□□□ 0.38
SHMT2-234ENST00000557703 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
SHMT2-234ENST00000557703 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
SHMT2-234ENST00000557703 ADCY9O60503 1353 aa17.4■□□□□ 0.38
SHMT2-234ENST00000557703 H0YIN7 160 aa17.4■□□□□ 0.38
SHMT2-234ENST00000557703 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
SHMT2-234ENST00000557703 NTSR2O95665 410 aa17.4■□□□□ 0.38
SHMT2-234ENST00000557703 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms