RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 COPS6Q7L5N1 327 aa18.03■□□□□ 0.48
SUPT16H-208ENST00000557652 XAGE3Q8WTP9 111 aa18.03■□□□□ 0.48
SUPT16H-208ENST00000557652 GYS1P13807 737 aa18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 FLIIQ13045 1269 aa18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 SSH1Q8WYL5 1049 aa18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 ATP10DQ9P241 1426 aa18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 TBC1D2BQ9UPU7 963 aa18.02■□□□□ 0.48
SUPT16H-208ENST00000557652 PSDA5PKW4 1024 aaPredicted RBP18.01■□□□□ 0.47
SUPT16H-208ENST00000557652 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
SUPT16H-208ENST00000557652 MRPL50Q8N5N7 158 aaKnown RBP18.01■□□□□ 0.47
SUPT16H-208ENST00000557652 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
SUPT16H-208ENST00000557652 N4BP2Q86UW6 1770 aaPredicted RBP18■□□□□ 0.47
SUPT16H-208ENST00000557652 ANXA1P04083 346 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 USPL1Q5W0Q7 1092 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 KSR2Q6VAB6 950 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 ARXQ96QS3 562 aa18■□□□□ 0.47
SUPT16H-208ENST00000557652 LRP5O75197 1615 aa17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 POLD1P28340 1107 aa17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 SPON1Q9HCB6 807 aa17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
SUPT16H-208ENST00000557652 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 NRXN2Q9P2S2 1712 aa17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-208ENST00000557652 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
SUPT16H-208ENST00000557652 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
SUPT16H-208ENST00000557652 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
SUPT16H-208ENST00000557652 TCIRG1Q13488 830 aa17.97■□□□□ 0.47
SUPT16H-208ENST00000557652 TM4SF1P30408 202 aa17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 FKBP8Q14318 412 aa17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 ZBTB3Q9H5J0 574 aa17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
SUPT16H-208ENST00000557652 PI4KAP2A4QPH2 592 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 PI4KAP1Q8N8J0 262 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 DNAAF4Q8WXU2 420 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
SUPT16H-208ENST00000557652 ADCY9O60503 1353 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 ZBTB7AO95365 584 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 MS4A1P11836 297 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 NFIXQ14938 502 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 G2E3Q7L622 706 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 SGIP1Q9BQI5 828 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 NYXQ9GZU5 481 aa17.94■□□□□ 0.46
SUPT16H-208ENST00000557652 MMP10P09238 476 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 HLFQ16534 295 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 CCDC191Q8NCU4 936 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 ISCA1Q9BUE6 129 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 MAP3K2Q9Y2U5 619 aa17.93■□□□□ 0.46
SUPT16H-208ENST00000557652 HSP90B1P14625 803 aaKnown RBP17.92■□□□□ 0.46
SUPT16H-208ENST00000557652 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
SUPT16H-208ENST00000557652 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
SUPT16H-208ENST00000557652 RIC1Q4ADV7 1423 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 POLRMTO00411 1230 aaKnown RBP17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 PTGER2P43116 358 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 BCL2L13Q9BXK5 485 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
SUPT16H-208ENST00000557652 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 MSL1Q68DK7 614 aa17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 ATF7IPQ6VMQ6 1270 aa17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 NOB1Q9ULX3 412 aaKnown RBP17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 MYH3P11055 1940 aa17.9■□□□□ 0.46
SUPT16H-208ENST00000557652 LAMB2P55268 1798 aa17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 BCAR3O75815 825 aa17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 SERPINB2P05120 415 aa17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 CCT4P50991 539 aaKnown RBP17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 NLRP10Q86W26 655 aa17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
SUPT16H-208ENST00000557652 DDR1Q08345 913 aa17.88■□□□□ 0.45
SUPT16H-208ENST00000557652 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
SUPT16H-208ENST00000557652 MYD88Q99836 296 aa17.88■□□□□ 0.45
SUPT16H-208ENST00000557652 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
SUPT16H-208ENST00000557652 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
SUPT16H-208ENST00000557652 ST5P78524 1137 aa17.87■□□□□ 0.45
SUPT16H-208ENST00000557652 BEND3Q5T5X7 828 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms