RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 EAPPQ56P03 285 aaPredicted RBP13.67□□□□□ -0.22
APEX1-218ENST00000557344 CNBD1Q8NA66 436 aa13.67□□□□□ -0.22
APEX1-218ENST00000557344 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
APEX1-218ENST00000557344 MASTLQ96GX5 879 aa13.67□□□□□ -0.22
APEX1-218ENST00000557344 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
APEX1-218ENST00000557344 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
APEX1-218ENST00000557344 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
APEX1-218ENST00000557344 HACL1Q9UJ83 578 aa13.66□□□□□ -0.22
APEX1-218ENST00000557344 WDR33Q9C0J8 1336 aaKnown RBP13.65□□□□□ -0.22
APEX1-218ENST00000557344 HMOX1P09601 288 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 EPHX2P34913 555 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
APEX1-218ENST00000557344 ST5P78524 1137 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 TTC5Q8N0Z6 440 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 CNTROBQ8N137 903 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
APEX1-218ENST00000557344 TEX13AQ9BXU3 409 aaPredicted RBP13.65□□□□□ -0.22
APEX1-218ENST00000557344 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 NPC1L1Q9UHC9 1359 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
APEX1-218ENST00000557344 ZNF541Q9H0D2 1346 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 SCN7AQ01118 1682 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 HEG1Q9ULI3 1381 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 NPHP1O15259 732 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 RGS19P49795 217 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
APEX1-218ENST00000557344 PNMA8AQ86V59 439 aaPredicted RBP13.64□□□□□ -0.23
APEX1-218ENST00000557344 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
APEX1-218ENST00000557344 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
APEX1-218ENST00000557344 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
APEX1-218ENST00000557344 FKBP4Q02790 459 aaKnown RBP eCLIP13.63□□□□□ -0.23
APEX1-218ENST00000557344 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
APEX1-218ENST00000557344 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
APEX1-218ENST00000557344 ZNF277Q9NRM2 450 aaPredicted RBP13.63□□□□□ -0.23
APEX1-218ENST00000557344 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
APEX1-218ENST00000557344 A1BGP04217 495 aa13.62□□□□□ -0.23
APEX1-218ENST00000557344 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
APEX1-218ENST00000557344 KLRG2A4D1S0 409 aaPredicted RBP13.61□□□□□ -0.23
APEX1-218ENST00000557344 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
APEX1-218ENST00000557344 FZD9O00144 591 aa13.61□□□□□ -0.23
APEX1-218ENST00000557344 NPR1P16066 1061 aa13.61□□□□□ -0.23
APEX1-218ENST00000557344 ABT1Q9ULW3 272 aaKnown RBP13.61□□□□□ -0.23
APEX1-218ENST00000557344 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
APEX1-218ENST00000557344 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
APEX1-218ENST00000557344 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
APEX1-218ENST00000557344 NPM2Q86SE8 214 aaKnown RBP13.6□□□□□ -0.23
APEX1-218ENST00000557344 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
APEX1-218ENST00000557344 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
APEX1-218ENST00000557344 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
APEX1-218ENST00000557344 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
APEX1-218ENST00000557344 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
APEX1-218ENST00000557344 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
APEX1-218ENST00000557344 TEFQ10587 303 aa13.59□□□□□ -0.23
APEX1-218ENST00000557344 GPC2Q8N158 579 aa13.59□□□□□ -0.23
APEX1-218ENST00000557344 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
APEX1-218ENST00000557344 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.24
APEX1-218ENST00000557344 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
APEX1-218ENST00000557344 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
APEX1-218ENST00000557344 CAPNS2Q96L46 248 aa13.58□□□□□ -0.24
APEX1-218ENST00000557344 GPR101Q96P66 508 aaPredicted RBP13.58□□□□□ -0.24
APEX1-218ENST00000557344 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
APEX1-218ENST00000557344 ECE1P42892 770 aa13.57□□□□□ -0.24
APEX1-218ENST00000557344 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
APEX1-218ENST00000557344 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
APEX1-218ENST00000557344 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
APEX1-218ENST00000557344 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.24
APEX1-218ENST00000557344 CYP4F22Q6NT55 531 aa13.56□□□□□ -0.24
APEX1-218ENST00000557344 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
APEX1-218ENST00000557344 USP16Q9Y5T5 823 aa13.56□□□□□ -0.24
APEX1-218ENST00000557344 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 KCNQ3O43525 872 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 ALDH1B1P30837 517 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
APEX1-218ENST00000557344 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
APEX1-218ENST00000557344 CST9Q5W186 159 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
APEX1-218ENST00000557344 JDP2Q8WYK2 163 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 PSMD1Q99460 953 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
APEX1-218ENST00000557344 RGL2O15211 777 aa13.54□□□□□ -0.24
APEX1-218ENST00000557344 MAP2K2P36507 400 aa13.54□□□□□ -0.24
APEX1-218ENST00000557344 GRM1Q13255 1194 aa13.54□□□□□ -0.24
APEX1-218ENST00000557344 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
APEX1-218ENST00000557344 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
APEX1-218ENST00000557344 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
APEX1-218ENST00000557344 BTBD11A6QL63 1104 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
APEX1-218ENST00000557344 EPS15P42566 896 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 SCNN1DP51172 638 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
APEX1-218ENST00000557344 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 NIP7Q9Y221 180 aaKnown RBP eCLIP13.53□□□□□ -0.24
APEX1-218ENST00000557344 GJA3Q9Y6H8 435 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 CEMIPQ8WUJ3 1361 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 LTBP1Q14766 1721 aa13.53□□□□□ -0.24
APEX1-218ENST00000557344 TRAF5O00463 557 aa13.52□□□□□ -0.25
APEX1-218ENST00000557344 AOC2O75106 756 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms