RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 C2CD5Q86YS7 1000 aa14.98□□□□□ -0.01
HNRNPC-231ENST00000557336 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
HNRNPC-231ENST00000557336 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
HNRNPC-231ENST00000557336 A0A087WZG4 1122 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 BTBD11A6QL63 1104 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 PIP4K2AP48426 406 aaPredicted RBP14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 DCTN1Q14203 1278 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 PRR5LQ6MZQ0 368 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 MCM10Q7L590 875 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
HNRNPC-231ENST00000557336 DLEC1Q9Y238 1755 aa14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 U2AF1L5P0DN76 240 aaPredicted RBP14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 U2AF1Q01081 240 aaKnown RBP eCLIP14.96□□□□□ -0.016e-11■■□□□ 14.2
HNRNPC-231ENST00000557336 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 ANKRD31Q8N7Z5 1873 aa14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 CFAP53Q96M91 514 aa14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
HNRNPC-231ENST00000557336 H0YIN7 160 aa14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 APLP1P51693 650 aa14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 ZNF330Q9Y3S2 320 aaPredicted RBP14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 SCN7AQ01118 1682 aa14.95□□□□□ -0.02
HNRNPC-231ENST00000557336 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
HNRNPC-231ENST00000557336 LMNB1P20700 586 aa14.94□□□□□ -0.02
HNRNPC-231ENST00000557336 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
HNRNPC-231ENST00000557336 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
HNRNPC-231ENST00000557336 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
HNRNPC-231ENST00000557336 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
HNRNPC-231ENST00000557336 HTRA3P83110 453 aa14.93□□□□□ -0.02
HNRNPC-231ENST00000557336 EVX2Q03828 476 aa14.93□□□□□ -0.02
HNRNPC-231ENST00000557336 POTECB2RU33 542 aa14.92□□□□□ -0.02
HNRNPC-231ENST00000557336 DZIP3Q86Y13 1208 aaKnown RBP14.92□□□□□ -0.02
HNRNPC-231ENST00000557336 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
HNRNPC-231ENST00000557336 ZC3H4Q9UPT8 1303 aaKnown RBP14.92□□□□□ -0.02
HNRNPC-231ENST00000557336 HTATSF1O43719 755 aaKnown RBP14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 C21orf2O43822 256 aa14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 SNRPA1P09661 255 aaKnown RBP14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 IFFO2Q5TF58 517 aa14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 SETDB2Q96T68 719 aa14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 MIS18AQ9NYP9 233 aa14.91□□□□□ -0.02
HNRNPC-231ENST00000557336 GLTPD2A6NH11 291 aa14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 SRGNP10124 158 aa14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 PDE6BP35913 854 aa14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 FSTL1Q12841 308 aa14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 PLEKHF1Q96S99 279 aa14.9□□□□□ -0.02
HNRNPC-231ENST00000557336 BCORQ6W2J9 1755 aa14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 TAF7Q15545 349 aaPredicted RBP14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 CLEC4GQ6UXB4 293 aa14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 CNBD1Q8NA66 436 aa14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 C7orf43Q8WVR3 580 aa14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 PDZRN3Q9UPQ7 1066 aa14.89□□□□□ -0.03
HNRNPC-231ENST00000557336 KLRG2A4D1S0 409 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-231ENST00000557336 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
HNRNPC-231ENST00000557336 SLX4Q8IY92 1834 aa14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 HLFQ16534 295 aa14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 STYK1Q6J9G0 422 aa14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 LTBP3Q9NS15 1303 aa14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
HNRNPC-231ENST00000557336 FER1L6Q2WGJ9 1857 aa14.86□□□□□ -0.03
HNRNPC-231ENST00000557336 HAX1O00165 279 aa14.86□□□□□ -0.03
HNRNPC-231ENST00000557336 VEGFAP15692 232 aaPredicted RBP14.86□□□□□ -0.03
HNRNPC-231ENST00000557336 THUMPD2Q9BTF0 503 aaKnown RBP14.86□□□□□ -0.03
HNRNPC-231ENST00000557336 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
HNRNPC-231ENST00000557336 CCDC88AQ3V6T2 1871 aa14.85□□□□□ -0.03
HNRNPC-231ENST00000557336 RGL2O15211 777 aa14.85□□□□□ -0.03
HNRNPC-231ENST00000557336 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
HNRNPC-231ENST00000557336 KLRG1Q96E93 195 aa14.85□□□□□ -0.03
HNRNPC-231ENST00000557336 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
HNRNPC-231ENST00000557336 TIAM2Q8IVF5 1701 aa14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 EIF4A1P60842 406 aaKnown RBP14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 ST5P78524 1137 aa14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 OLFM4Q6UX06 510 aa14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 NPM2Q86SE8 214 aaKnown RBP14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 NBPF5PQ86XG9 351 aaPredicted RBP14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
HNRNPC-231ENST00000557336 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
HNRNPC-231ENST00000557336 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
HNRNPC-231ENST00000557336 ERFEQ4G0M1 354 aa14.83□□□□□ -0.04
HNRNPC-231ENST00000557336 TTLL7Q6ZT98 887 aa14.82□□□□□ -0.04
HNRNPC-231ENST00000557336 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
HNRNPC-231ENST00000557336 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
HNRNPC-231ENST00000557336 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 DDNO94850 711 aaPredicted RBP14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 NPR1P16066 1061 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 TPTE2Q6XPS3 522 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 DLG5Q8TDM6 1919 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 SNED1Q8TER0 1413 aa14.81□□□□□ -0.04
HNRNPC-231ENST00000557336 KDM3BQ7LBC6 1761 aa14.8□□□□□ -0.04
HNRNPC-231ENST00000557336 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
HNRNPC-231ENST00000557336 NPHP1O15259 732 aa14.8□□□□□ -0.04
HNRNPC-231ENST00000557336 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms