RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
TRAPPC6B-206ENST00000556765 LTBP3Q9NS15 1303 aa18.54■□□□□ 0.56
TRAPPC6B-206ENST00000556765 EAPPQ56P03 285 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC6B-206ENST00000556765 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC6B-206ENST00000556765 TAOK3Q9H2K8 898 aa18.54■□□□□ 0.56
TRAPPC6B-206ENST00000556765 APAF1O14727 1248 aa18.53■□□□□ 0.56
TRAPPC6B-206ENST00000556765 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRAPPC6B-206ENST00000556765 BEGAINQ9BUH8 593 aa18.53■□□□□ 0.56
TRAPPC6B-206ENST00000556765 SCN4AP35499 1836 aa18.53■□□□□ 0.56
TRAPPC6B-206ENST00000556765 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC6B-206ENST00000556765 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
TRAPPC6B-206ENST00000556765 ABT1Q9ULW3 272 aaKnown RBP18.52■□□□□ 0.56
TRAPPC6B-206ENST00000556765 CLEC11AQ9Y240 323 aa18.52■□□□□ 0.56
TRAPPC6B-206ENST00000556765 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.56
TRAPPC6B-206ENST00000556765 E9PSI1 815 aa18.51■□□□□ 0.55
TRAPPC6B-206ENST00000556765 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
TRAPPC6B-206ENST00000556765 THSD7BQ9C0I4 1608 aa18.51■□□□□ 0.55
TRAPPC6B-206ENST00000556765 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
TRAPPC6B-206ENST00000556765 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
TRAPPC6B-206ENST00000556765 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
TRAPPC6B-206ENST00000556765 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
TRAPPC6B-206ENST00000556765 MCOLN1Q9GZU1 580 aa18.5■□□□□ 0.55
TRAPPC6B-206ENST00000556765 CNTROBQ8N137 903 aa18.49■□□□□ 0.55
TRAPPC6B-206ENST00000556765 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
TRAPPC6B-206ENST00000556765 COL15A1P39059 1388 aa18.49■□□□□ 0.55
TRAPPC6B-206ENST00000556765 ADAMTSL1Q8N6G6 1762 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 MAP1SQ66K74 1059 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 HACL1Q9UJ83 578 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 TSKSQ9UJT2 592 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
TRAPPC6B-206ENST00000556765 IL13P35225 146 aa18.47■□□□□ 0.55
TRAPPC6B-206ENST00000556765 PLEKHO1Q53GL0 409 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC6B-206ENST00000556765 DNAJC10Q8IXB1 793 aa18.47■□□□□ 0.55
TRAPPC6B-206ENST00000556765 CAPNS2Q96L46 248 aa18.47■□□□□ 0.55
TRAPPC6B-206ENST00000556765 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC6B-206ENST00000556765 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 EPHX2P34913 555 aa18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 PDE6BP35913 854 aa18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 SLFN5Q08AF3 891 aa18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 PAXIP1Q6ZW49 1069 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 TRMT2AQ8IZ69 625 aaKnown RBP18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 GPR101Q96P66 508 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC6B-206ENST00000556765 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.54
TRAPPC6B-206ENST00000556765 ECE1P42892 770 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 GRM1Q13255 1194 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 IL16Q14005 1332 aa18.45■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CYP19A1P11511 503 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC6B-206ENST00000556765 DUSP27Q5VZP5 1158 aa18.44■□□□□ 0.54
TRAPPC6B-206ENST00000556765 PNMA8AQ86V59 439 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC6B-206ENST00000556765 ZNF541Q9H0D2 1346 aa18.44■□□□□ 0.54
TRAPPC6B-206ENST00000556765 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 SOGA3Q5TF21 947 aa18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CYP4F22Q6NT55 531 aa18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 RSPH6AQ9H0K4 717 aa18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 ZBTB1Q9Y2K1 713 aa18.43■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
TRAPPC6B-206ENST00000556765 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
TRAPPC6B-206ENST00000556765 AMOTQ4VCS5 1084 aa18.42■□□□□ 0.54
TRAPPC6B-206ENST00000556765 C1orf141Q5JVX7 400 aa18.42■□□□□ 0.54
TRAPPC6B-206ENST00000556765 PRPF40BQ6NWY9 871 aaKnown RBP18.42■□□□□ 0.54
TRAPPC6B-206ENST00000556765 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 DGKZQ13574 1117 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CCDC24Q8N4L8 307 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CNKSR1Q969H4 720 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CDCA7LQ96GN5 454 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 SLX4Q8IY92 1834 aa18.41■□□□□ 0.54
TRAPPC6B-206ENST00000556765 PRPF38BQ5VTL8 546 aaKnown RBP18.4■□□□□ 0.54
TRAPPC6B-206ENST00000556765 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
TRAPPC6B-206ENST00000556765 CA12O43570 354 aa18.39■□□□□ 0.53
TRAPPC6B-206ENST00000556765 CT47B1P0C2W7 299 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC6B-206ENST00000556765 CASP8AP2Q9UKL3 1982 aa18.39■□□□□ 0.53
TRAPPC6B-206ENST00000556765 CACNA1SQ13698 1873 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 AOC2O75106 756 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 MAP2K2P36507 400 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 TBC1D9BQ66K14 1250 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC6B-206ENST00000556765 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
TRAPPC6B-206ENST00000556765 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
TRAPPC6B-206ENST00000556765 FMR1Q06787 632 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRAPPC6B-206ENST00000556765 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
TRAPPC6B-206ENST00000556765 SRGNP10124 158 aa18.36■□□□□ 0.53
TRAPPC6B-206ENST00000556765 CCDC93Q567U6 631 aa18.36■□□□□ 0.53
TRAPPC6B-206ENST00000556765 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC6B-206ENST00000556765 ARFGEF2Q9Y6D5 1785 aa18.36■□□□□ 0.53
TRAPPC6B-206ENST00000556765 CANXP27824 592 aaKnown RBP18.35■□□□□ 0.53
TRAPPC6B-206ENST00000556765 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRAPPC6B-206ENST00000556765 MASTLQ96GX5 879 aa18.35■□□□□ 0.53
TRAPPC6B-206ENST00000556765 TLL2Q9Y6L7 1015 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms