RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
ACTN1-221ENST00000556571 ANKRD31Q8N7Z5 1873 aa15.97■□□□□ 0.15
ACTN1-221ENST00000556571 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
ACTN1-221ENST00000556571 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
ACTN1-221ENST00000556571 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
ACTN1-221ENST00000556571 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-221ENST00000556571 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
ACTN1-221ENST00000556571 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 KCNQ3O43525 872 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 CCDC93Q567U6 631 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 LDHDQ86WU2 507 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 L3MBTL3Q96JM7 780 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-221ENST00000556571 ZNF652Q9Y2D9 606 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
ACTN1-221ENST00000556571 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
ACTN1-221ENST00000556571 NPR1P16066 1061 aa15.94■□□□□ 0.14
ACTN1-221ENST00000556571 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-221ENST00000556571 COL3A1P02461 1466 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-221ENST00000556571 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
ACTN1-221ENST00000556571 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
ACTN1-221ENST00000556571 KLRG2A4D1S0 409 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-221ENST00000556571 SNRPA1P09661 255 aaKnown RBP15.93■□□□□ 0.14
ACTN1-221ENST00000556571 TPTE2Q6XPS3 522 aa15.93■□□□□ 0.14
ACTN1-221ENST00000556571 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
ACTN1-221ENST00000556571 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
ACTN1-221ENST00000556571 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
ACTN1-221ENST00000556571 COL11A2P13942 1736 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-221ENST00000556571 RGL2O15211 777 aa15.92■□□□□ 0.14
ACTN1-221ENST00000556571 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
ACTN1-221ENST00000556571 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
ACTN1-221ENST00000556571 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-221ENST00000556571 TMEM88BA6NKF7 163 aa15.91■□□□□ 0.14
ACTN1-221ENST00000556571 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-221ENST00000556571 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
ACTN1-221ENST00000556571 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
ACTN1-221ENST00000556571 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
ACTN1-221ENST00000556571 FOXN1O15353 648 aa15.9■□□□□ 0.14
ACTN1-221ENST00000556571 ITGBL1O95965 494 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-221ENST00000556571 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
ACTN1-221ENST00000556571 PRDM10Q9NQV6 1147 aa15.9■□□□□ 0.14
ACTN1-221ENST00000556571 ZNF277Q9NRM2 450 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-221ENST00000556571 HACL1Q9UJ83 578 aa15.9■□□□□ 0.14
ACTN1-221ENST00000556571 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACTN1-221ENST00000556571 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
ACTN1-221ENST00000556571 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
ACTN1-221ENST00000556571 ALDH1B1P30837 517 aa15.89■□□□□ 0.13
ACTN1-221ENST00000556571 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-221ENST00000556571 AIDAQ96BJ3 306 aa15.89■□□□□ 0.13
ACTN1-221ENST00000556571 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-221ENST00000556571 EPHX2P34913 555 aa15.88■□□□□ 0.13
ACTN1-221ENST00000556571 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-221ENST00000556571 VEGFBP49765 207 aa15.88■□□□□ 0.13
ACTN1-221ENST00000556571 PNMA8AQ86V59 439 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-221ENST00000556571 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
ACTN1-221ENST00000556571 ZNF541Q9H0D2 1346 aa15.88■□□□□ 0.13
ACTN1-221ENST00000556571 NBPF26B4DH59 902 aa15.87■□□□□ 0.13
ACTN1-221ENST00000556571 GTF2E1P29083 439 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-221ENST00000556571 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
ACTN1-221ENST00000556571 MCM10Q7L590 875 aa15.87■□□□□ 0.13
ACTN1-221ENST00000556571 NBPF15Q8N660 670 aa15.87■□□□□ 0.13
ACTN1-221ENST00000556571 SCN4AP35499 1836 aa15.87■□□□□ 0.13
ACTN1-221ENST00000556571 FAM177BA6PVY3 158 aa15.86■□□□□ 0.13
ACTN1-221ENST00000556571 FZD9O00144 591 aa15.86■□□□□ 0.13
ACTN1-221ENST00000556571 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
ACTN1-221ENST00000556571 U2AF1L5P0DN76 240 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-221ENST00000556571 IARSP41252 1262 aaKnown RBP15.86■□□□□ 0.13
ACTN1-221ENST00000556571 U2AF1Q01081 240 aaKnown RBP eCLIP15.86■□□□□ 0.13
ACTN1-221ENST00000556571 OLFM4Q6UX06 510 aa15.86■□□□□ 0.13
ACTN1-221ENST00000556571 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
ACTN1-221ENST00000556571 BCORQ6W2J9 1755 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 CNTROBQ8N137 903 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 GPC2Q8N158 579 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 PSMD1Q99460 953 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 WBP1LQ9NX94 342 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 ARFGEF2Q9Y6D5 1785 aa15.85■□□□□ 0.13
ACTN1-221ENST00000556571 TAF7Q15545 349 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-221ENST00000556571 HLFQ16534 295 aa15.84■□□□□ 0.13
ACTN1-221ENST00000556571 DEFB115Q30KQ5 88 aa15.84■□□□□ 0.13
ACTN1-221ENST00000556571 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
ACTN1-221ENST00000556571 RNF123Q5XPI4 1314 aa15.84■□□□□ 0.13
ACTN1-221ENST00000556571 RASSF10A6NK89 507 aa15.83■□□□□ 0.12
ACTN1-221ENST00000556571 DCTN1Q14203 1278 aa15.83■□□□□ 0.12
ACTN1-221ENST00000556571 CRY2Q49AN0 593 aa15.83■□□□□ 0.12
ACTN1-221ENST00000556571 MAP1SQ66K74 1059 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-221ENST00000556571 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
ACTN1-221ENST00000556571 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
ACTN1-221ENST00000556571 CACNA1SQ13698 1873 aa15.82■□□□□ 0.12
ACTN1-221ENST00000556571 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
ACTN1-221ENST00000556571 LBX1P52954 281 aa15.81■□□□□ 0.12
ACTN1-221ENST00000556571 EIF6P56537 245 aaKnown RBP15.81■□□□□ 0.12
ACTN1-221ENST00000556571 MAP2K1Q02750 393 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-221ENST00000556571 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
ACTN1-221ENST00000556571 LMOD1P29536 600 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-221ENST00000556571 PNISRQ8TF01 805 aaKnown RBP15.8■□□□□ 0.12
ACTN1-221ENST00000556571 ABT1Q9ULW3 272 aaKnown RBP15.8■□□□□ 0.12
ACTN1-221ENST00000556571 PPP2R1AP30153 589 aa15.79■□□□□ 0.12
ACTN1-221ENST00000556571 HOXA10P31260 410 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-221ENST00000556571 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms