RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 FOXN1O15353 648 aa20.7■□□□□ 0.9
SUPT16H-205ENST00000556217 A1BGP04217 495 aa20.7■□□□□ 0.9
SUPT16H-205ENST00000556217 CNKSR1Q969H4 720 aa20.7■□□□□ 0.9
SUPT16H-205ENST00000556217 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 CHADLQ6NUI6 762 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 CCDC24Q8N4L8 307 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 LTBP3Q9NS15 1303 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
SUPT16H-205ENST00000556217 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
SUPT16H-205ENST00000556217 STYK1Q6J9G0 422 aa20.68■□□□□ 0.9
SUPT16H-205ENST00000556217 DZIP3Q86Y13 1208 aaKnown RBP20.68■□□□□ 0.9
SUPT16H-205ENST00000556217 AIDAQ96BJ3 306 aa20.68■□□□□ 0.9
SUPT16H-205ENST00000556217 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
SUPT16H-205ENST00000556217 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
SUPT16H-205ENST00000556217 PHACTR3Q96KR7 559 aa20.67■□□□□ 0.9
SUPT16H-205ENST00000556217 NUDCQ9Y266 331 aa20.67■□□□□ 0.9
SUPT16H-205ENST00000556217 SRGNP10124 158 aa20.66■□□□□ 0.9
SUPT16H-205ENST00000556217 MASTLQ96GX5 879 aa20.66■□□□□ 0.9
SUPT16H-205ENST00000556217 RSPH6AQ9H0K4 717 aa20.66■□□□□ 0.9
SUPT16H-205ENST00000556217 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
SUPT16H-205ENST00000556217 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
SUPT16H-205ENST00000556217 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
SUPT16H-205ENST00000556217 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
SUPT16H-205ENST00000556217 CNTNAP1P78357 1384 aa20.64■□□□□ 0.89
SUPT16H-205ENST00000556217 KCNQ3O43525 872 aa20.64■□□□□ 0.89
SUPT16H-205ENST00000556217 NBPF5PQ86XG9 351 aaPredicted RBP20.64■□□□□ 0.89
SUPT16H-205ENST00000556217 SNRPA1P09661 255 aaKnown RBP20.63■□□□□ 0.89
SUPT16H-205ENST00000556217 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
SUPT16H-205ENST00000556217 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
SUPT16H-205ENST00000556217 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
SUPT16H-205ENST00000556217 IQCA1LA6NCM1 817 aa20.6■□□□□ 0.89
SUPT16H-205ENST00000556217 RGL2O15211 777 aa20.6■□□□□ 0.89
SUPT16H-205ENST00000556217 NPR1P16066 1061 aa20.6■□□□□ 0.89
SUPT16H-205ENST00000556217 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
SUPT16H-205ENST00000556217 SCN4AP35499 1836 aa20.6■□□□□ 0.89
SUPT16H-205ENST00000556217 DDNO94850 711 aaPredicted RBP20.59■□□□□ 0.89
SUPT16H-205ENST00000556217 CCDC93Q567U6 631 aa20.59■□□□□ 0.89
SUPT16H-205ENST00000556217 TPTE2Q6XPS3 522 aa20.59■□□□□ 0.89
SUPT16H-205ENST00000556217 MCM10Q7L590 875 aa20.59■□□□□ 0.89
SUPT16H-205ENST00000556217 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 POTEIP0CG38 1075 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 POTEJP0CG39 1038 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 VEGFBP49765 207 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 WBP1LQ9NX94 342 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 PCDH10Q9P2E7 1040 aa20.58■□□□□ 0.89
SUPT16H-205ENST00000556217 PASKQ96RG2 1323 aa20.57■□□□□ 0.88
SUPT16H-205ENST00000556217 LBX1P52954 281 aa20.57■□□□□ 0.88
SUPT16H-205ENST00000556217 FAM161AQ3B820 660 aa20.57■□□□□ 0.88
SUPT16H-205ENST00000556217 LDHDQ86WU2 507 aa20.57■□□□□ 0.88
SUPT16H-205ENST00000556217 NIP7Q9Y221 180 aaKnown RBP eCLIP20.57■□□□□ 0.88
SUPT16H-205ENST00000556217 KLRG2A4D1S0 409 aaPredicted RBP20.56■□□□□ 0.88
SUPT16H-205ENST00000556217 TMEM88BA6NKF7 163 aa20.56■□□□□ 0.88
SUPT16H-205ENST00000556217 C7orf43Q8WVR3 580 aa20.56■□□□□ 0.88
SUPT16H-205ENST00000556217 ABHD8Q96I13 439 aa20.56■□□□□ 0.88
SUPT16H-205ENST00000556217 LAMB4A4D0S4 1761 aa20.55■□□□□ 0.88
SUPT16H-205ENST00000556217 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
SUPT16H-205ENST00000556217 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
SUPT16H-205ENST00000556217 RTKN2Q8IZC4 609 aa20.55■□□□□ 0.88
SUPT16H-205ENST00000556217 L3MBTL3Q96JM7 780 aaPredicted RBP20.55■□□□□ 0.88
SUPT16H-205ENST00000556217 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 GTF2E1P29083 439 aaPredicted RBP20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 ALDH1B1P30837 517 aa20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 TAF7Q15545 349 aaPredicted RBP20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
SUPT16H-205ENST00000556217 NEFMP07197 916 aa20.53■□□□□ 0.88
SUPT16H-205ENST00000556217 DCTN1Q14203 1278 aa20.53■□□□□ 0.88
SUPT16H-205ENST00000556217 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
SUPT16H-205ENST00000556217 TAF1DQ9H5J8 278 aaPredicted RBP20.52■□□□□ 0.88
SUPT16H-205ENST00000556217 ZNF277Q9NRM2 450 aaPredicted RBP20.52■□□□□ 0.88
SUPT16H-205ENST00000556217 ITGBL1O95965 494 aaPredicted RBP20.51■□□□□ 0.87
SUPT16H-205ENST00000556217 HSPA8P11142 646 aaKnown RBP20.5■□□□□ 0.87
SUPT16H-205ENST00000556217 MAP2K1Q02750 393 aaPredicted RBP20.5■□□□□ 0.87
SUPT16H-205ENST00000556217 PNISRQ8TF01 805 aaKnown RBP20.5■□□□□ 0.87
SUPT16H-205ENST00000556217 NYXQ9GZU5 481 aa20.5■□□□□ 0.87
SUPT16H-205ENST00000556217 HACL1Q9UJ83 578 aa20.5■□□□□ 0.87
SUPT16H-205ENST00000556217 DLG5Q8TDM6 1919 aa20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 NUP98P52948 1817 aa20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 MLLT1Q03111 559 aaPredicted RBP20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 HLFQ16534 295 aa20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 DEFB115Q30KQ5 88 aa20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
SUPT16H-205ENST00000556217 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
SUPT16H-205ENST00000556217 MIS18AQ9NYP9 233 aa20.48■□□□□ 0.87
SUPT16H-205ENST00000556217 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SUPT16H-205ENST00000556217 KDM3BQ7LBC6 1761 aa20.48■□□□□ 0.87
SUPT16H-205ENST00000556217 RASSF10A6NK89 507 aa20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 OLFM4Q6UX06 510 aa20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 KIF6Q6ZMV9 814 aa20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 PNMA8AQ86V59 439 aaPredicted RBP20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
SUPT16H-205ENST00000556217 EPHX2P34913 555 aa20.46■□□□□ 0.87
SUPT16H-205ENST00000556217 CC2D2BQ6DHV5 1058 aa20.46■□□□□ 0.87
SUPT16H-205ENST00000556217 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
SUPT16H-205ENST00000556217 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms