RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 ERVV-1B6SEH8 477 aa18.13■□□□□ 0.49
SNX6-206ENST00000556162 FKBP8Q14318 412 aa18.13■□□□□ 0.49
SNX6-206ENST00000556162 BCL2L12Q9HB09 334 aa18.13■□□□□ 0.49
SNX6-206ENST00000556162 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
SNX6-206ENST00000556162 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 C4AP0C0L4 1744 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 RGL2O15211 777 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 POLD1P28340 1107 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
SNX6-206ENST00000556162 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
SNX6-206ENST00000556162 SSH1Q8WYL5 1049 aa18.11■□□□□ 0.49
SNX6-206ENST00000556162 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
SNX6-206ENST00000556162 HLFQ16534 295 aa18.1■□□□□ 0.49
SNX6-206ENST00000556162 G2E3Q7L622 706 aa18.1■□□□□ 0.49
SNX6-206ENST00000556162 PLBD2Q8NHP8 589 aa18.1■□□□□ 0.49
SNX6-206ENST00000556162 FLIIQ13045 1269 aa18.09■□□□□ 0.49
SNX6-206ENST00000556162 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
SNX6-206ENST00000556162 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
SNX6-206ENST00000556162 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
SNX6-206ENST00000556162 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
SNX6-206ENST00000556162 MMP10P09238 476 aa18.08■□□□□ 0.49
SNX6-206ENST00000556162 TM4SF1P30408 202 aa18.08■□□□□ 0.49
SNX6-206ENST00000556162 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.49
SNX6-206ENST00000556162 TBC1D9BQ66K14 1250 aa18.08■□□□□ 0.49
SNX6-206ENST00000556162 BICDL1Q6ZP65 573 aa18.08■□□□□ 0.49
SNX6-206ENST00000556162 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.49
SNX6-206ENST00000556162 PTGER2P43116 358 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
SNX6-206ENST00000556162 NFIXQ14938 502 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 HSP90AB3PQ58FF7 597 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 SETDB2Q96T68 719 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 SGIP1Q9BQI5 828 aa18.07■□□□□ 0.48
SNX6-206ENST00000556162 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
SNX6-206ENST00000556162 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
SNX6-206ENST00000556162 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
SNX6-206ENST00000556162 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
SNX6-206ENST00000556162 CACNA1FO60840 1977 aa18.05■□□□□ 0.48
SNX6-206ENST00000556162 SCN7AQ01118 1682 aa18.05■□□□□ 0.48
SNX6-206ENST00000556162 MAP3K2Q9Y2U5 619 aa18.05■□□□□ 0.48
SNX6-206ENST00000556162 DDR1Q08345 913 aa18.04■□□□□ 0.48
SNX6-206ENST00000556162 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
SNX6-206ENST00000556162 GPTP24298 496 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
SNX6-206ENST00000556162 BCORQ6W2J9 1755 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
SNX6-206ENST00000556162 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 CARMIL3Q8ND23 1372 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 PTPRCP08575 1304 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 SERPINB2P05120 415 aa18.03■□□□□ 0.48
SNX6-206ENST00000556162 METTL22Q9BUU2 404 aaPredicted RBP18.03■□□□□ 0.48
SNX6-206ENST00000556162 BCAR3O75815 825 aa18.02■□□□□ 0.48
SNX6-206ENST00000556162 ADCY9O60503 1353 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 PARP10Q53GL7 1025 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 MYD88Q99836 296 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
SNX6-206ENST00000556162 FAM177BA6PVY3 158 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 NPHP1O15259 732 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
SNX6-206ENST00000556162 NUP98P52948 1817 aa18.01■□□□□ 0.47
SNX6-206ENST00000556162 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
SNX6-206ENST00000556162 KIF16BQ96L93 1317 aa18■□□□□ 0.47
SNX6-206ENST00000556162 PPP1R42Q7Z4L9 355 aa18■□□□□ 0.47
SNX6-206ENST00000556162 ISCA1Q9BUE6 129 aa18■□□□□ 0.47
SNX6-206ENST00000556162 UBN2Q6ZU65 1347 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 F6X3S4 739 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
SNX6-206ENST00000556162 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
SNX6-206ENST00000556162 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 NYXQ9GZU5 481 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 GTF2E1P29083 439 aaPredicted RBP17.99■□□□□ 0.47
SNX6-206ENST00000556162 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 CNBD1Q8NA66 436 aa17.99■□□□□ 0.47
SNX6-206ENST00000556162 FRAT1Q92837 279 aaPredicted RBP17.99■□□□□ 0.47
SNX6-206ENST00000556162 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
SNX6-206ENST00000556162 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
SNX6-206ENST00000556162 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
SNX6-206ENST00000556162 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
SNX6-206ENST00000556162 ST5P78524 1137 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 PRR5LQ6MZQ0 368 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 CWC25Q9NXE8 425 aaPredicted RBP17.97■□□□□ 0.47
SNX6-206ENST00000556162 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
SNX6-206ENST00000556162 ARFGEF2Q9Y6D5 1785 aa17.97■□□□□ 0.47
SNX6-206ENST00000556162 IGKV5-2P06315 115 aa17.96■□□□□ 0.47
SNX6-206ENST00000556162 LRP5O75197 1615 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 CWF19L2Q2TBE0 894 aaKnown RBP17.95■□□□□ 0.46
SNX6-206ENST00000556162 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
SNX6-206ENST00000556162 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms