RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 GNAI3P08754 354 aa11.88□□□□□ -0.51
HNRNPC-223ENST00000556142 UBR2Q8IWV8 1755 aa11.87□□□□□ -0.51
HNRNPC-223ENST00000556142 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-223ENST00000556142 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
HNRNPC-223ENST00000556142 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-223ENST00000556142 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
HNRNPC-223ENST00000556142 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
HNRNPC-223ENST00000556142 EXOC5O00471 708 aa11.86□□□□□ -0.51
HNRNPC-223ENST00000556142 ATP8B2P98198 1209 aa11.86□□□□□ -0.51
HNRNPC-223ENST00000556142 CDCA7Q9BWT1 371 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-223ENST00000556142 MAP3K2Q9Y2U5 619 aa11.86□□□□□ -0.51
HNRNPC-223ENST00000556142 ALDH1L1O75891 902 aa11.85□□□□□ -0.51
HNRNPC-223ENST00000556142 ANKRD45Q5TZF3 282 aa11.85□□□□□ -0.51
HNRNPC-223ENST00000556142 PIGBQ92521 554 aa11.85□□□□□ -0.51
HNRNPC-223ENST00000556142 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
HNRNPC-223ENST00000556142 XAGE3Q8WTP9 111 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 LNPKQ9C0E8 428 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 COPS6Q7L5N1 327 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 TMOD3Q9NYL9 352 aa11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-223ENST00000556142 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 UTYO14607 1347 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 BCL9O00512 1426 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 MYL6BP14649 208 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 POLA2Q14181 598 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 LINS1Q8NG48 757 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.52
HNRNPC-223ENST00000556142 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 UBTFL1P0CB47 393 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 AIMP1Q12904 312 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-223ENST00000556142 HMMRO75330 724 aa11.81□□□□□ -0.52
HNRNPC-223ENST00000556142 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
HNRNPC-223ENST00000556142 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
HNRNPC-223ENST00000556142 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
HNRNPC-223ENST00000556142 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
HNRNPC-223ENST00000556142 PLSCR1O15162 318 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 SEC24BO95487 1268 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 A1BGP04217 495 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 DDB1Q16531 1140 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 RIC3Q7Z5B4 369 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 PLEKHM2Q8IWE5 1019 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 MARCH10Q8NA82 808 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
HNRNPC-223ENST00000556142 NEURL1BA8MQ27 555 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 ZBTB7AO95365 584 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 MTX1Q13505 466 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 KAZALD1Q96I82 304 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 ITGB4P16144 1822 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 RGPD3A6NKT7 1758 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 RGPD4Q7Z3J3 1758 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 TEX13AQ9BXU3 409 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 PDGFDQ9GZP0 370 aaPredicted RBP11.79□□□□□ -0.52
HNRNPC-223ENST00000556142 GRM8O00222 908 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 SMARCA5O60264 1052 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 PTGER2P43116 358 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 BMP2KLQ5H9B9 411 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 DNAJC10Q8IXB1 793 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 MYD88Q99836 296 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
HNRNPC-223ENST00000556142 GCKRQ14397 625 aa11.77□□□□□ -0.53
HNRNPC-223ENST00000556142 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-223ENST00000556142 SUCLG2Q96I99 432 aa11.77□□□□□ -0.53
HNRNPC-223ENST00000556142 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-223ENST00000556142 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-223ENST00000556142 COL15A1P39059 1388 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 CASP7P55210 303 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 SYT17Q9BSW7 474 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 FOXD4L1Q9NU39 408 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 EXOC6BQ9Y2D4 811 aa11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-223ENST00000556142 CYP19A1P11511 503 aaPredicted RBP11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 NEXNQ0ZGT2 675 aa11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
HNRNPC-223ENST00000556142 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms