RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 GLIS2Q9BZE0 524 aaPredicted RBP16.6■□□□□ 0.25
ABCD4-222ENST00000555617 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
ABCD4-222ENST00000555617 CACNA1AO00555 2505 aa16.6■□□□□ 0.25
ABCD4-222ENST00000555617 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
ABCD4-222ENST00000555617 SCNN1DP51172 638 aa16.59■□□□□ 0.25
ABCD4-222ENST00000555617 CCDC24Q8N4L8 307 aa16.59■□□□□ 0.25
ABCD4-222ENST00000555617 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
ABCD4-222ENST00000555617 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
ABCD4-222ENST00000555617 FZD9O00144 591 aa16.58■□□□□ 0.24
ABCD4-222ENST00000555617 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
ABCD4-222ENST00000555617 FBXO46Q6PJ61 603 aaPredicted RBP16.58■□□□□ 0.24
ABCD4-222ENST00000555617 DLK2Q6UY11 383 aa16.58■□□□□ 0.24
ABCD4-222ENST00000555617 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
ABCD4-222ENST00000555617 LRCH3Q96II8 777 aa16.57■□□□□ 0.24
ABCD4-222ENST00000555617 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
ABCD4-222ENST00000555617 TTC28Q96AY4 2481 aa16.57■□□□□ 0.24
ABCD4-222ENST00000555617 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
ABCD4-222ENST00000555617 GPC2Q8N158 579 aa16.56■□□□□ 0.24
ABCD4-222ENST00000555617 PLA2G5P39877 138 aa16.55■□□□□ 0.24
ABCD4-222ENST00000555617 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
ABCD4-222ENST00000555617 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
ABCD4-222ENST00000555617 MUC3AQ02505 3323 aa16.54■□□□□ 0.24
ABCD4-222ENST00000555617 ANKRD26Q9UPS8 1709 aa16.54■□□□□ 0.24
ABCD4-222ENST00000555617 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
ABCD4-222ENST00000555617 HUNKP57058 714 aa16.54■□□□□ 0.24
ABCD4-222ENST00000555617 PRO3102Q9H379 93 aa16.54■□□□□ 0.24
ABCD4-222ENST00000555617 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
ABCD4-222ENST00000555617 C7orf43Q8WVR3 580 aa16.53■□□□□ 0.24
ABCD4-222ENST00000555617 HDAC9Q9UKV0 1011 aa16.53■□□□□ 0.24
ABCD4-222ENST00000555617 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
ABCD4-222ENST00000555617 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
ABCD4-222ENST00000555617 AMPHP49418 695 aa16.5■□□□□ 0.23
ABCD4-222ENST00000555617 EYSQ5T1H1 3165 aa16.49■□□□□ 0.23
ABCD4-222ENST00000555617 RGMBQ6NW40 437 aa16.49■□□□□ 0.23
ABCD4-222ENST00000555617 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
ABCD4-222ENST00000555617 PPARGC1BQ86YN6 1023 aaKnown RBP16.49■□□□□ 0.23
ABCD4-222ENST00000555617 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
ABCD4-222ENST00000555617 EVC2Q86UK5 1308 aa16.48■□□□□ 0.23
ABCD4-222ENST00000555617 TBC1D8O95759 1140 aa16.48■□□□□ 0.23
ABCD4-222ENST00000555617 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
ABCD4-222ENST00000555617 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
ABCD4-222ENST00000555617 ZPR1O75312 459 aa16.46■□□□□ 0.23
ABCD4-222ENST00000555617 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
ABCD4-222ENST00000555617 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
ABCD4-222ENST00000555617 Q7L0L9 218 aa16.45■□□□□ 0.22
ABCD4-222ENST00000555617 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
ABCD4-222ENST00000555617 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
ABCD4-222ENST00000555617 CCDC93Q567U6 631 aa16.44■□□□□ 0.22
ABCD4-222ENST00000555617 SNX27Q96L92 541 aa16.44■□□□□ 0.22
ABCD4-222ENST00000555617 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
ABCD4-222ENST00000555617 STXBP5LQ9Y2K9 1186 aa16.44■□□□□ 0.22
ABCD4-222ENST00000555617 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
ABCD4-222ENST00000555617 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
ABCD4-222ENST00000555617 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
ABCD4-222ENST00000555617 SLC10A3P09131 477 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 PHKG2P15735 406 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 PRR5LQ6MZQ0 368 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
ABCD4-222ENST00000555617 SRGNP10124 158 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 HIRAP54198 1017 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-222ENST00000555617 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 FAM122AQ96E09 287 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 R3HDMLQ9H3Y0 253 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 PGAP2Q9UHJ9 254 aa16.42■□□□□ 0.22
ABCD4-222ENST00000555617 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
ABCD4-222ENST00000555617 GPR25O00155 361 aa16.41■□□□□ 0.22
ABCD4-222ENST00000555617 PDE6BP35913 854 aa16.41■□□□□ 0.22
ABCD4-222ENST00000555617 ZNF157P51786 506 aaPredicted RBP16.41■□□□□ 0.22
ABCD4-222ENST00000555617 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
ABCD4-222ENST00000555617 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
ABCD4-222ENST00000555617 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
ABCD4-222ENST00000555617 PRUNE2Q8WUY3 3088 aa16.4■□□□□ 0.22
ABCD4-222ENST00000555617 COL15A1P39059 1388 aa16.39■□□□□ 0.21
ABCD4-222ENST00000555617 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
ABCD4-222ENST00000555617 INTS3Q68E01 1043 aaKnown RBP16.38■□□□□ 0.21
ABCD4-222ENST00000555617 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
ABCD4-222ENST00000555617 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
ABCD4-222ENST00000555617 TBC1D9BQ66K14 1250 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 SLC51AQ86UW1 340 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 DEFB123Q8N688 67 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 STAC3Q96MF2 364 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
ABCD4-222ENST00000555617 TRPM4Q8TD43 1214 aa16.36■□□□□ 0.21
ABCD4-222ENST00000555617 GBA2Q9HCG7 927 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-222ENST00000555617 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
ABCD4-222ENST00000555617 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
ABCD4-222ENST00000555617 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
ABCD4-222ENST00000555617 RASAL3Q86YV0 1011 aa16.35■□□□□ 0.21
ABCD4-222ENST00000555617 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
ABCD4-222ENST00000555617 SHTN1A0MZ66 631 aa16.34■□□□□ 0.21
ABCD4-222ENST00000555617 DNAJC10Q8IXB1 793 aa16.34■□□□□ 0.21
ABCD4-222ENST00000555617 IFNL2Q8IZJ0 200 aa16.34■□□□□ 0.21
ABCD4-222ENST00000555617 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
ABCD4-222ENST00000555617 CDC37L1Q7L3B6 337 aa16.33■□□□□ 0.2
ABCD4-222ENST00000555617 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
ABCD4-222ENST00000555617 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms