RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 LAMB4A4D0S4 1761 aa25.9■■□□□ 1.74
ARHGEF40-204ENST00000555038 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
ARHGEF40-204ENST00000555038 ANO2Q9NQ90 1003 aa25.9■■□□□ 1.74
ARHGEF40-204ENST00000555038 ERBB4Q15303 1308 aa25.89■■□□□ 1.73
ARHGEF40-204ENST00000555038 METTL22Q9BUU2 404 aaPredicted RBP25.88■■□□□ 1.73
ARHGEF40-204ENST00000555038 COL15A1P39059 1388 aa25.87■■□□□ 1.73
ARHGEF40-204ENST00000555038 IGKV5-2P06315 115 aa25.87■■□□□ 1.73
ARHGEF40-204ENST00000555038 CABP4P57796 275 aa25.87■■□□□ 1.73
ARHGEF40-204ENST00000555038 AIMP1Q12904 312 aaKnown RBP25.87■■□□□ 1.73
ARHGEF40-204ENST00000555038 SUCLG2Q96I99 432 aa25.87■■□□□ 1.73
ARHGEF40-204ENST00000555038 PCDH11XQ9BZA7 1347 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 PCDH11YQ9BZA8 1340 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 NEURL1BA8MQ27 555 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 GOLGA6L22H0YM25 854 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 LRP10Q7Z4F1 713 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 XAGE3Q8WTP9 111 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 ECHDC1Q9NTX5 307 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 FOXD4L1Q9NU39 408 aa25.86■■□□□ 1.73
ARHGEF40-204ENST00000555038 ISY1Q9ULR0 285 aaKnown RBP25.85■■□□□ 1.73
ARHGEF40-204ENST00000555038 SGSM2O43147 1006 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 COPS6Q7L5N1 327 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 KAZALD1Q96I82 304 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 PRDM11Q9NQV5 511 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 GLI3P10071 1580 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 CYP2E1P05181 493 aaPredicted RBP25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 GCKRQ14397 625 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 ANKRD13DQ6ZTN6 518 aa25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 BICC1Q9H694 974 aaKnown RBP25.84■■□□□ 1.73
ARHGEF40-204ENST00000555038 IFIT2P09913 472 aaKnown RBP25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 HSPA4P34932 840 aa25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 NEK4P51957 841 aa25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 G3BP1Q13283 466 aaKnown RBP eCLIP25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 SLAIN2Q9P270 581 aa25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 COL5A2P05997 1499 aaPredicted RBP25.83■■□□□ 1.73
ARHGEF40-204ENST00000555038 RAD50Q92878 1312 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 MYL6BP14649 208 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 ABCA3Q99758 1704 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 ERVV-2B6SEH9 535 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 SSFA2P28290 1259 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 RUFY2Q8WXA3 655 aa25.82■■□□□ 1.72
ARHGEF40-204ENST00000555038 ZCRB1Q8TBF4 217 aaKnown RBP25.81■■□□□ 1.72
ARHGEF40-204ENST00000555038 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
ARHGEF40-204ENST00000555038 FSD2A1L4K1 749 aa25.8■■□□□ 1.72
ARHGEF40-204ENST00000555038 NKX1-1Q15270 411 aaPredicted RBP25.8■■□□□ 1.72
ARHGEF40-204ENST00000555038 MYD88Q99836 296 aa25.8■■□□□ 1.72
ARHGEF40-204ENST00000555038 CUL4AQ13619 759 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 INTS4Q96HW7 963 aaKnown RBP25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 CARD10Q9BWT7 1032 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 PALD1Q9ULE6 856 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 UBR2Q8IWV8 1755 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 GOLGA6L3A6NEY3 463 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 TOM1L2Q6ZVM7 507 aa25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 PA2G4Q9UQ80 394 aaKnown RBP25.79■■□□□ 1.72
ARHGEF40-204ENST00000555038 ARFGEF2Q9Y6D5 1785 aa25.78■■□□□ 1.72
ARHGEF40-204ENST00000555038 EVI5LQ96CN4 794 aa25.78■■□□□ 1.72
ARHGEF40-204ENST00000555038 PAPPAQ13219 1627 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 HIP1O00291 1037 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 BAG4O95429 457 aaKnown RBP25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 KIAA1211Q6ZU35 1233 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 PLBD2Q8NHP8 589 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 TMX3Q96JJ7 454 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 SASH1O94885 1247 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 AACSQ86V21 672 aa25.77■■□□□ 1.72
ARHGEF40-204ENST00000555038 LSG1Q9H089 658 aaKnown RBP25.76■■□□□ 1.71
ARHGEF40-204ENST00000555038 DIAPH3Q9NSV4 1193 aa25.76■■□□□ 1.71
ARHGEF40-204ENST00000555038 MAP4K4O95819 1239 aaPredicted RBP25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 IL2RBP14784 551 aa25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 RABL6Q3YEC7 729 aaPredicted RBP25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 COPRSQ9NQ92 184 aa25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 NHSL1Q5SYE7 1610 aa25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 AFDNP55196 1824 aaKnown RBP25.75■■□□□ 1.71
ARHGEF40-204ENST00000555038 IL25Q9H293 177 aa25.74■■□□□ 1.71
ARHGEF40-204ENST00000555038 ZGPATQ8N5A5 531 aaKnown RBP25.72■■□□□ 1.71
ARHGEF40-204ENST00000555038 KCPQ6ZWJ8 1503 aa25.72■■□□□ 1.71
ARHGEF40-204ENST00000555038 EAF2Q96CJ1 260 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF40-204ENST00000555038 GZF1Q9H116 711 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF40-204ENST00000555038 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
ARHGEF40-204ENST00000555038 ZNF335Q9H4Z2 1342 aaPredicted RBP25.71■■□□□ 1.71
ARHGEF40-204ENST00000555038 SHANK3Q9BYB0 1731 aa25.71■■□□□ 1.71
ARHGEF40-204ENST00000555038 KLHL40Q2TBA0 621 aa25.7■■□□□ 1.7
ARHGEF40-204ENST00000555038 CWC27Q6UX04 472 aaKnown RBP25.7■■□□□ 1.7
ARHGEF40-204ENST00000555038 BRPF3Q9ULD4 1205 aa25.7■■□□□ 1.7
ARHGEF40-204ENST00000555038 MRE11P49959 708 aa25.69■■□□□ 1.7
ARHGEF40-204ENST00000555038 SNRKQ9NRH2 765 aa25.69■■□□□ 1.7
ARHGEF40-204ENST00000555038 SNX14Q9Y5W7 946 aa25.69■■□□□ 1.7
ARHGEF40-204ENST00000555038 RFX5P48382 616 aaPredicted RBP25.69■■□□□ 1.7
ARHGEF40-204ENST00000555038 EPHA10Q5JZY3 1008 aa25.68■■□□□ 1.7
ARHGEF40-204ENST00000555038 KCNB2Q92953 911 aa25.68■■□□□ 1.7
ARHGEF40-204ENST00000555038 NUP188Q5SRE5 1749 aa25.68■■□□□ 1.7
ARHGEF40-204ENST00000555038 CASP7P55210 303 aa25.67■■□□□ 1.7
ARHGEF40-204ENST00000555038 A0A087WZG4 1122 aa25.66■■□□□ 1.7
ARHGEF40-204ENST00000555038 UBE3BQ7Z3V4 1068 aa25.66■■□□□ 1.7
ARHGEF40-204ENST00000555038 TM6SF1Q9BZW5 370 aa25.66■■□□□ 1.7
ARHGEF40-204ENST00000555038 NBPF26B4DH59 902 aa25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 PTPN12Q05209 780 aaKnown RBP25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 NBPF14Q5TI25 921 aa25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 NBPF10Q6P3W6 841 aaKnown RBP25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 NBPF15Q8N660 670 aa25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 UPF3BQ9BZI7 483 aaKnown RBP25.65■■□□□ 1.7
ARHGEF40-204ENST00000555038 ZDHHC9Q9Y397 364 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 294.3 ms