RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
SHMT2-211ENST00000554310 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
SHMT2-211ENST00000554310 HOXB7P09629 217 aa17.01■□□□□ 0.31
SHMT2-211ENST00000554310 MYL6BP14649 208 aa17.01■□□□□ 0.31
SHMT2-211ENST00000554310 KCNA3P22001 575 aa17.01■□□□□ 0.31
SHMT2-211ENST00000554310 CHRNA5P30532 468 aa17.01■□□□□ 0.31
SHMT2-211ENST00000554310 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 ERVV-1B6SEH8 477 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 ZNF853P0CG23 659 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 GNAI1P63096 354 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 CCDC27Q2M243 656 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
SHMT2-211ENST00000554310 MBIPQ9NS73 344 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 PDZRN3Q9UPQ7 1066 aa17■□□□□ 0.31
SHMT2-211ENST00000554310 NPHP1O15259 732 aa16.99■□□□□ 0.31
SHMT2-211ENST00000554310 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
SHMT2-211ENST00000554310 ST5P78524 1137 aa16.99■□□□□ 0.31
SHMT2-211ENST00000554310 PDIA6Q15084 440 aa16.99■□□□□ 0.31
SHMT2-211ENST00000554310 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
SHMT2-211ENST00000554310 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
SHMT2-211ENST00000554310 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHMT2-211ENST00000554310 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
SHMT2-211ENST00000554310 PDE6BP35913 854 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 KRT24Q2M2I5 525 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 TTLL7Q6ZT98 887 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 LRP10Q7Z4F1 713 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-211ENST00000554310 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 ADCY9O60503 1353 aa16.98■□□□□ 0.31
SHMT2-211ENST00000554310 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-211ENST00000554310 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
SHMT2-211ENST00000554310 H0YIN7 160 aa16.97■□□□□ 0.31
SHMT2-211ENST00000554310 HLFQ16534 295 aa16.97■□□□□ 0.31
SHMT2-211ENST00000554310 C2CD5Q86YS7 1000 aa16.97■□□□□ 0.31
SHMT2-211ENST00000554310 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-211ENST00000554310 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
SHMT2-211ENST00000554310 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
SHMT2-211ENST00000554310 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
SHMT2-211ENST00000554310 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHMT2-211ENST00000554310 TPTE2Q6XPS3 522 aa16.95■□□□□ 0.3
SHMT2-211ENST00000554310 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
SHMT2-211ENST00000554310 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 TTLL6Q8N841 843 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 NECTIN2Q92692 538 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 CACNA1SQ13698 1873 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
SHMT2-211ENST00000554310 IL16Q14005 1332 aa16.94■□□□□ 0.3
SHMT2-211ENST00000554310 ANXA1P04083 346 aa16.93■□□□□ 0.3
SHMT2-211ENST00000554310 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
SHMT2-211ENST00000554310 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
SHMT2-211ENST00000554310 DBF4Q9UBU7 674 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-211ENST00000554310 UBN2Q6ZU65 1347 aa16.92■□□□□ 0.3
SHMT2-211ENST00000554310 SRGNP10124 158 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 STYK1Q6J9G0 422 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 ZNF34Q8IZ26 560 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
SHMT2-211ENST00000554310 SBF1O95248 1867 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 ABCC12Q96J65 1359 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 GPTP24298 496 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 GTF2E1P29083 439 aaPredicted RBP16.9■□□□□ 0.3
SHMT2-211ENST00000554310 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHMT2-211ENST00000554310 MASTLQ96GX5 879 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
SHMT2-211ENST00000554310 KLRG2A4D1S0 409 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-211ENST00000554310 CENPBP07199 599 aaPredicted RBP16.89■□□□□ 0.29
SHMT2-211ENST00000554310 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
SHMT2-211ENST00000554310 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
SHMT2-211ENST00000554310 FER1L6Q2WGJ9 1857 aa16.88■□□□□ 0.29
SHMT2-211ENST00000554310 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
SHMT2-211ENST00000554310 NTSR2O95665 410 aa16.88■□□□□ 0.29
SHMT2-211ENST00000554310 NPR1P16066 1061 aa16.88■□□□□ 0.29
SHMT2-211ENST00000554310 PPP1R42Q7Z4L9 355 aa16.88■□□□□ 0.29
SHMT2-211ENST00000554310 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
SHMT2-211ENST00000554310 SUSD4Q5VX71 490 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 WDR63Q8IWG1 891 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
SHMT2-211ENST00000554310 ELL2O00472 640 aaPredicted RBP16.86■□□□□ 0.29
SHMT2-211ENST00000554310 CRY2Q49AN0 593 aa16.86■□□□□ 0.29
SHMT2-211ENST00000554310 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
SHMT2-211ENST00000554310 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
SHMT2-211ENST00000554310 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
SHMT2-211ENST00000554310 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
SHMT2-211ENST00000554310 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
SHMT2-211ENST00000554310 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
SHMT2-211ENST00000554310 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms