RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IGKV5-2P06315 115 aa8.67□□□□□ -1.02
LINC00517-202ENST00000554257 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
LINC00517-202ENST00000554257 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.02
LINC00517-202ENST00000554257 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
LINC00517-202ENST00000554257 A0A0G2JS52 829 aa8.67□□□□□ -1.02
LINC00517-202ENST00000554257 MYT1Q01538 1121 aa8.67□□□□□ -1.02
LINC00517-202ENST00000554257 RBM42Q9BTD8 480 aaKnown RBP8.67□□□□□ -1.02
LINC00517-202ENST00000554257 CCNL1Q9UK58 526 aaPredicted RBP8.67□□□□□ -1.02
LINC00517-202ENST00000554257 RIC1Q4ADV7 1423 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 EZH2Q15910 746 aaKnown RBP8.66□□□□□ -1.02
LINC00517-202ENST00000554257 XAGE3Q8WTP9 111 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 RPS6KA4O75676 772 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 EIF2S2P20042 333 aaKnown RBP8.66□□□□□ -1.02
LINC00517-202ENST00000554257 TMEM57Q8N5G2 664 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 MAP3K15Q6ZN16 1313 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 UBN2Q6ZU65 1347 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 ZBTB7BO15156 539 aaPredicted RBP8.66□□□□□ -1.02
LINC00517-202ENST00000554257 ZKSCAN2Q63HK3 967 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 SMIM5Q71RC9 77 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 PANK1Q8TE04 598 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
LINC00517-202ENST00000554257 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 HLFQ16534 295 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 KSR2Q6VAB6 950 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 COPS6Q7L5N1 327 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.02
LINC00517-202ENST00000554257 ERVV-1B6SEH8 477 aa8.65□□□□□ -1.03
LINC00517-202ENST00000554257 F6X3S4 739 aa8.65□□□□□ -1.03
LINC00517-202ENST00000554257 APBA3O96018 575 aa8.65□□□□□ -1.03
LINC00517-202ENST00000554257 MVPQ14764 893 aaKnown RBP8.65□□□□□ -1.03
LINC00517-202ENST00000554257 KAZALD1Q96I82 304 aa8.65□□□□□ -1.03
LINC00517-202ENST00000554257 STARD3NLO95772 234 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 ZNF34Q8IZ26 560 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 USP42Q9H9J4 1324 aaKnown RBP8.64□□□□□ -1.03
LINC00517-202ENST00000554257 MYL6BP14649 208 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 CRBNQ96SW2 442 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
LINC00517-202ENST00000554257 ZBTB40Q9NUA8 1239 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 ARFGEF1Q9Y6D6 1849 aa8.64□□□□□ -1.03
LINC00517-202ENST00000554257 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
LINC00517-202ENST00000554257 TRIM28Q13263 835 aaKnown RBP8.64□□□□□ -1.03
LINC00517-202ENST00000554257 DZIP1LQ8IYY4 767 aaKnown RBP8.64□□□□□ -1.03
LINC00517-202ENST00000554257 PI4KAP2A4QPH2 592 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 PI4KAP1Q8N8J0 262 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 MAP3K2Q9Y2U5 619 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 NEURL1BA8MQ27 555 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 SSFA2P28290 1259 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 DEFB132Q7Z7B7 95 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
LINC00517-202ENST00000554257 EXOC6Q8TAG9 804 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 DNAAF4Q8WXU2 420 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 ARHGEF1Q92888 912 aaKnown RBP8.63□□□□□ -1.03
LINC00517-202ENST00000554257 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 API5Q9BZZ5 524 aaKnown RBP8.63□□□□□ -1.03
LINC00517-202ENST00000554257 USP44Q9H0E7 712 aa8.63□□□□□ -1.03
LINC00517-202ENST00000554257 PSME4Q14997 1843 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 ADRA2BP18089 450 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 SIRT2Q8IXJ6 389 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 CHMP4AQ9BY43 222 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
LINC00517-202ENST00000554257 TM4SF1P30408 202 aa8.61□□□□□ -1.03
LINC00517-202ENST00000554257 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
LINC00517-202ENST00000554257 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
LINC00517-202ENST00000554257 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
LINC00517-202ENST00000554257 COL23A1Q86Y22 540 aaPredicted RBP8.61□□□□□ -1.03
LINC00517-202ENST00000554257 DOCK2Q92608 1830 aa8.61□□□□□ -1.03
LINC00517-202ENST00000554257 MYH13Q9UKX3 1938 aa8.61□□□□□ -1.03
LINC00517-202ENST00000554257 H7C1W4 665 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 IPO8O15397 1037 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 NTSR2O95665 410 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 GYS1P13807 737 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 CWF19L2Q2TBE0 894 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 CLEC4GQ6UXB4 293 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 AKAP11Q9UKA4 1901 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 GCKRQ14397 625 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 MEIS3Q99687 375 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 FER1L6Q2WGJ9 1857 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 SNED1Q8TER0 1413 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 GNPATO15228 680 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 SLC15A2Q16348 729 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 NLRP10Q86W26 655 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 PDGFDQ9GZP0 370 aaPredicted RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 DUOX1Q9NRD9 1551 aa8.6□□□□□ -1.03
LINC00517-202ENST00000554257 MYO5AQ9Y4I1 1855 aaKnown RBP8.6□□□□□ -1.03
LINC00517-202ENST00000554257 ABCC12Q96J65 1359 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 CDHR2Q9BYE9 1310 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 AK9Q5TCS8 1911 aa8.59□□□□□ -1.03
LINC00517-202ENST00000554257 NBPF7P0C2Y1 421 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms