RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 MASTLQ96GX5 879 aa22.89■■□□□ 1.25
SEC23A-206ENST00000553970 CCDC88AQ3V6T2 1871 aa22.89■■□□□ 1.25
SEC23A-206ENST00000553970 ERFEQ4G0M1 354 aa22.88■■□□□ 1.25
SEC23A-206ENST00000553970 NBPF5PQ86XG9 351 aaPredicted RBP22.88■■□□□ 1.25
SEC23A-206ENST00000553970 TAOK3Q9H2K8 898 aa22.88■■□□□ 1.25
SEC23A-206ENST00000553970 USP16Q9Y5T5 823 aa22.88■■□□□ 1.25
SEC23A-206ENST00000553970 KCNQ3O43525 872 aa22.87■■□□□ 1.25
SEC23A-206ENST00000553970 SRGNP10124 158 aa22.87■■□□□ 1.25
SEC23A-206ENST00000553970 MCM10Q7L590 875 aa22.87■■□□□ 1.25
SEC23A-206ENST00000553970 COL11A2P13942 1736 aaPredicted RBP22.87■■□□□ 1.25
SEC23A-206ENST00000553970 FER1L6Q2WGJ9 1857 aa22.87■■□□□ 1.25
SEC23A-206ENST00000553970 TAF7Q15545 349 aaPredicted RBP22.86■■□□□ 1.25
SEC23A-206ENST00000553970 PNISRQ8TF01 805 aaKnown RBP22.86■■□□□ 1.25
SEC23A-206ENST00000553970 DICER1Q9UPY3 1922 aaKnown RBP22.86■■□□□ 1.25
SEC23A-206ENST00000553970 PRELPP51888 382 aa22.85■■□□□ 1.25
SEC23A-206ENST00000553970 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
SEC23A-206ENST00000553970 TPTE2Q6XPS3 522 aa22.85■■□□□ 1.25
SEC23A-206ENST00000553970 JMYQ8N9B5 988 aa22.85■■□□□ 1.25
SEC23A-206ENST00000553970 PNNQ9H307 717 aaKnown RBP22.85■■□□□ 1.25
SEC23A-206ENST00000553970 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
SEC23A-206ENST00000553970 NPR1P16066 1061 aa22.83■■□□□ 1.25
SEC23A-206ENST00000553970 CCDC24Q8N4L8 307 aa22.83■■□□□ 1.25
SEC23A-206ENST00000553970 ZNF219Q9P2Y4 722 aaPredicted RBP22.83■■□□□ 1.25
SEC23A-206ENST00000553970 CCDC93Q567U6 631 aa22.81■■□□□ 1.24
SEC23A-206ENST00000553970 NIP7Q9Y221 180 aaKnown RBP eCLIP22.81■■□□□ 1.24
SEC23A-206ENST00000553970 PIP4K2AP48426 406 aaPredicted RBP22.8■■□□□ 1.24
SEC23A-206ENST00000553970 LAMB4A4D0S4 1761 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 KLRG2A4D1S0 409 aaPredicted RBP22.79■■□□□ 1.24
SEC23A-206ENST00000553970 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 GTF2E1P29083 439 aaPredicted RBP22.79■■□□□ 1.24
SEC23A-206ENST00000553970 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 NYXQ9GZU5 481 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 SLX4Q8IY92 1834 aa22.79■■□□□ 1.24
SEC23A-206ENST00000553970 ALDH1B1P30837 517 aa22.78■■□□□ 1.24
SEC23A-206ENST00000553970 HTRA3P83110 453 aa22.78■■□□□ 1.24
SEC23A-206ENST00000553970 CACNA1SQ13698 1873 aa22.78■■□□□ 1.24
SEC23A-206ENST00000553970 NBPF26B4DH59 902 aa22.77■■□□□ 1.24
SEC23A-206ENST00000553970 NBPF10Q6P3W6 841 aaKnown RBP22.77■■□□□ 1.24
SEC23A-206ENST00000553970 RTKN2Q8IZC4 609 aa22.77■■□□□ 1.24
SEC23A-206ENST00000553970 NBPF15Q8N660 670 aa22.77■■□□□ 1.24
SEC23A-206ENST00000553970 PCNTO95613 3336 aa22.77■■□□□ 1.24
SEC23A-206ENST00000553970 ERVV-1B6SEH8 477 aa22.76■■□□□ 1.23
SEC23A-206ENST00000553970 MAPK8IP3Q9UPT6 1336 aa22.76■■□□□ 1.23
SEC23A-206ENST00000553970 KIF6Q6ZMV9 814 aa22.75■■□□□ 1.23
SEC23A-206ENST00000553970 POTECB2RU33 542 aa22.74■■□□□ 1.23
SEC23A-206ENST00000553970 FKBP4Q02790 459 aaKnown RBP eCLIP22.74■■□□□ 1.23
SEC23A-206ENST00000553970 C7orf43Q8WVR3 580 aa22.74■■□□□ 1.23
SEC23A-206ENST00000553970 NFE2L2Q16236 605 aa22.73■■□□□ 1.23
SEC23A-206ENST00000553970 CHADLQ6NUI6 762 aa22.73■■□□□ 1.23
SEC23A-206ENST00000553970 KDM3BQ7LBC6 1761 aa22.73■■□□□ 1.23
SEC23A-206ENST00000553970 GRIPAP1Q4V328 841 aa22.72■■□□□ 1.23
SEC23A-206ENST00000553970 L3MBTL3Q96JM7 780 aaPredicted RBP22.72■■□□□ 1.23
SEC23A-206ENST00000553970 ERBB4Q15303 1308 aa22.72■■□□□ 1.23
SEC23A-206ENST00000553970 DLG5Q8TDM6 1919 aa22.72■■□□□ 1.23
SEC23A-206ENST00000553970 SCN4AP35499 1836 aa22.71■■□□□ 1.23
SEC23A-206ENST00000553970 DDNO94850 711 aaPredicted RBP22.71■■□□□ 1.23
SEC23A-206ENST00000553970 CC2D2BQ6DHV5 1058 aa22.71■■□□□ 1.23
SEC23A-206ENST00000553970 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
SEC23A-206ENST00000553970 MAP3K15Q6ZN16 1313 aa22.71■■□□□ 1.23
SEC23A-206ENST00000553970 IBTKQ9P2D0 1353 aaPredicted RBP22.71■■□□□ 1.23
SEC23A-206ENST00000553970 FAM177BA6PVY3 158 aa22.7■■□□□ 1.22
SEC23A-206ENST00000553970 EIF4A1P60842 406 aaKnown RBP22.7■■□□□ 1.22
SEC23A-206ENST00000553970 PLEKHF1Q96S99 279 aa22.7■■□□□ 1.22
SEC23A-206ENST00000553970 CREBZFQ9NS37 354 aa22.7■■□□□ 1.22
SEC23A-206ENST00000553970 HLFQ16534 295 aa22.69■■□□□ 1.22
SEC23A-206ENST00000553970 LDHDQ86WU2 507 aa22.69■■□□□ 1.22
SEC23A-206ENST00000553970 RIC1Q4ADV7 1423 aa22.68■■□□□ 1.22
SEC23A-206ENST00000553970 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
SEC23A-206ENST00000553970 RPGRQ92834 1020 aaKnown RBP22.68■■□□□ 1.22
SEC23A-206ENST00000553970 RRP7AQ9Y3A4 280 aaKnown RBP22.68■■□□□ 1.22
SEC23A-206ENST00000553970 NGEFQ8N5V2 710 aa22.67■■□□□ 1.22
SEC23A-206ENST00000553970 PSMD1Q99460 953 aa22.67■■□□□ 1.22
SEC23A-206ENST00000553970 NUP98P52948 1817 aa22.66■■□□□ 1.22
SEC23A-206ENST00000553970 LMOD3Q0VAK6 560 aa22.66■■□□□ 1.22
SEC23A-206ENST00000553970 JDP2Q8WYK2 163 aa22.66■■□□□ 1.22
SEC23A-206ENST00000553970 ZNF277Q9NRM2 450 aaPredicted RBP22.66■■□□□ 1.22
SEC23A-206ENST00000553970 BABAM1Q9NWV8 329 aa22.66■■□□□ 1.22
SEC23A-206ENST00000553970 IARSP41252 1262 aaKnown RBP22.65■■□□□ 1.22
SEC23A-206ENST00000553970 PNMA8AQ86V59 439 aaPredicted RBP22.65■■□□□ 1.22
SEC23A-206ENST00000553970 TMX4Q9H1E5 349 aaPredicted RBP22.65■■□□□ 1.22
SEC23A-206ENST00000553970 TAF1DQ9H5J8 278 aaPredicted RBP22.65■■□□□ 1.22
SEC23A-206ENST00000553970 HACL1Q9UJ83 578 aa22.65■■□□□ 1.22
SEC23A-206ENST00000553970 MYL6BP14649 208 aa22.64■■□□□ 1.21
SEC23A-206ENST00000553970 RALBP1Q15311 655 aa22.64■■□□□ 1.21
SEC23A-206ENST00000553970 PARP10Q53GL7 1025 aa22.64■■□□□ 1.21
SEC23A-206ENST00000553970 PPP1R42Q7Z4L9 355 aa22.64■■□□□ 1.21
SEC23A-206ENST00000553970 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.21
SEC23A-206ENST00000553970 SYNE4Q8N205 404 aa22.63■■□□□ 1.21
SEC23A-206ENST00000553970 RBM17Q96I25 401 aaKnown RBP22.63■■□□□ 1.21
SEC23A-206ENST00000553970 FZD9O00144 591 aa22.62■■□□□ 1.21
SEC23A-206ENST00000553970 HSPA1AP0DMV8 641 aaKnown RBP22.62■■□□□ 1.21
SEC23A-206ENST00000553970 HSPA1BP0DMV9 641 aaKnown RBP22.62■■□□□ 1.21
SEC23A-206ENST00000553970 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
SEC23A-206ENST00000553970 GIGYF2Q6Y7W6 1299 aaKnown RBP22.62■■□□□ 1.21
SEC23A-206ENST00000553970 TTLL7Q6ZT98 887 aa22.62■■□□□ 1.21
SEC23A-206ENST00000553970 NUTM1Q86Y26 1132 aa22.62■■□□□ 1.21
SEC23A-206ENST00000553970 GPC2Q8N158 579 aa22.62■■□□□ 1.21
SEC23A-206ENST00000553970 ABCC12Q96J65 1359 aa22.62■■□□□ 1.21
SEC23A-206ENST00000553970 EIF6P56537 245 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms