RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
CHD8-206ENST00000553870 E9PSI1 815 aa12.05□□□□□ -0.48
CHD8-206ENST00000553870 SERPINB2P05120 415 aa12.05□□□□□ -0.48
CHD8-206ENST00000553870 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
CHD8-206ENST00000553870 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
CHD8-206ENST00000553870 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
CHD8-206ENST00000553870 DDR1Q08345 913 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 TWISTNBQ3B726 338 aaPredicted RBP12.04□□□□□ -0.48
CHD8-206ENST00000553870 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 TTLL7Q6ZT98 887 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 CHPF2Q9P2E5 772 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 FANCIQ9NVI1 1328 aa12.04□□□□□ -0.48
CHD8-206ENST00000553870 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
CHD8-206ENST00000553870 HSP90AB3PQ58FF7 597 aa12.03□□□□□ -0.48
CHD8-206ENST00000553870 GIGYF2Q6Y7W6 1299 aaKnown RBP12.03□□□□□ -0.48
CHD8-206ENST00000553870 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
CHD8-206ENST00000553870 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
CHD8-206ENST00000553870 CARMIL3Q8ND23 1372 aa12.03□□□□□ -0.48
CHD8-206ENST00000553870 VAMP4O75379 141 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 EXOSC9Q06265 439 aaKnown RBP12.02□□□□□ -0.49
CHD8-206ENST00000553870 HLFQ16534 295 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 PLBD2Q8NHP8 589 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
CHD8-206ENST00000553870 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
CHD8-206ENST00000553870 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.491e-22■■■■■ 55.1
CHD8-206ENST00000553870 ANXA1P04083 346 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 AIMP1Q12904 312 aaKnown RBP12.01□□□□□ -0.49
CHD8-206ENST00000553870 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 ZNF428Q96B54 188 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 C10orf71Q711Q0 1435 aa12.01□□□□□ -0.49
CHD8-206ENST00000553870 DDX58O95786 925 aaKnown RBP12□□□□□ -0.49
CHD8-206ENST00000553870 PDE6BP35913 854 aa12□□□□□ -0.49
CHD8-206ENST00000553870 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
CHD8-206ENST00000553870 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
CHD8-206ENST00000553870 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
CHD8-206ENST00000553870 BRIP1Q9BX63 1249 aa12□□□□□ -0.49
CHD8-206ENST00000553870 NYXQ9GZU5 481 aa12□□□□□ -0.49
CHD8-206ENST00000553870 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
CHD8-206ENST00000553870 ATP10DQ9P241 1426 aa12□□□□□ -0.49
CHD8-206ENST00000553870 SCN7AQ01118 1682 aa12□□□□□ -0.49
CHD8-206ENST00000553870 GRIN3BO60391 1043 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
CHD8-206ENST00000553870 ST5P78524 1137 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 TRIM28Q13263 835 aaKnown RBP11.99□□□□□ -0.49
CHD8-206ENST00000553870 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 PRR5LQ6MZQ0 368 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 PPP1R42Q7Z4L9 355 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
CHD8-206ENST00000553870 BCORQ6W2J9 1755 aa11.98□□□□□ -0.49
CHD8-206ENST00000553870 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
CHD8-206ENST00000553870 RNF123Q5XPI4 1314 aa11.98□□□□□ -0.49
CHD8-206ENST00000553870 NPHP1O15259 732 aa11.98□□□□□ -0.49
CHD8-206ENST00000553870 GPR162Q16538 588 aa11.98□□□□□ -0.49
CHD8-206ENST00000553870 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
CHD8-206ENST00000553870 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
CHD8-206ENST00000553870 NRXN2Q9P2S2 1712 aa11.97□□□□□ -0.49
CHD8-206ENST00000553870 H0YIN7 160 aa11.97□□□□□ -0.49
CHD8-206ENST00000553870 DPEP1P16444 411 aa11.97□□□□□ -0.49
CHD8-206ENST00000553870 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
CHD8-206ENST00000553870 RIC3Q7Z5B4 369 aa11.97□□□□□ -0.49
CHD8-206ENST00000553870 PHAXQ9H814 394 aaKnown RBP11.97□□□□□ -0.49
CHD8-206ENST00000553870 A0A0G2JLW4 131 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 KLRG2A4D1S0 409 aaPredicted RBP11.96□□□□□ -0.49
CHD8-206ENST00000553870 KCNA3P22001 575 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 HNRNPUQ00839 825 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHD8-206ENST00000553870 SLC10A5Q5PT55 438 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 KSR2Q6VAB6 950 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 CDCA7LQ96GN5 454 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 ISCA1Q9BUE6 129 aa11.96□□□□□ -0.49
CHD8-206ENST00000553870 UTP14AQ9BVJ6 771 aaKnown RBP11.96□□□□□ -0.49
CHD8-206ENST00000553870 PXDNLA1KZ92 1463 aa11.95□□□□□ -0.5
CHD8-206ENST00000553870 NUP98P52948 1817 aa11.95□□□□□ -0.5
CHD8-206ENST00000553870 GPTP24298 496 aa11.95□□□□□ -0.5
CHD8-206ENST00000553870 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
CHD8-206ENST00000553870 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
CHD8-206ENST00000553870 C2CD5Q86YS7 1000 aa11.95□□□□□ -0.5
CHD8-206ENST00000553870 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
CHD8-206ENST00000553870 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 NTSR2O95665 410 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 HSP90B1P14625 803 aaKnown RBP11.94□□□□□ -0.5
CHD8-206ENST00000553870 FLIIQ13045 1269 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 TTLL6Q8N841 843 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 CCDC191Q8NCU4 936 aa11.94□□□□□ -0.5
CHD8-206ENST00000553870 AFDNP55196 1824 aaKnown RBP11.94□□□□□ -0.5
CHD8-206ENST00000553870 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 SRGNP10124 158 aa11.93□□□□□ -0.5
CHD8-206ENST00000553870 CHRNA5P30532 468 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 608.1 ms