RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ITGBL1O95965 494 aaPredicted RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 PSME1Q06323 249 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 FAM43BQ6ZT52 329 aaPredicted RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 SPIRE2Q8WWL2 714 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 PRKRIP1Q9H875 184 aaPredicted RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 SLC27A5Q9Y2P5 690 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 RGPD1P0DJD0 1748 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 LMTK3Q96Q04 1460 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 IBSPP21815 317 aaPredicted RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 ENOX2Q16206 610 aaKnown RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 SPSB2Q99619 263 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 TANGO6Q9C0B7 1094 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 RRAGDQ9NQL2 400 aaPredicted RBP5.08□□□□□ -1.6
RDH11-204ENST00000553578 NSD2O96028 1365 aa5.08□□□□□ -1.6
RDH11-204ENST00000553578 SENP3-EIF4A1A0A087X0R7 540 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 TSPOAP1O95153 1857 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 HDGFL1Q5TGJ6 251 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 ANKRD13AQ8IZ07 590 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 IQSEC2Q5JU85 1478 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 CHD2O14647 1828 aaKnown RBP5.07□□□□□ -1.6
RDH11-204ENST00000553578 COL3A1P02461 1466 aaPredicted RBP5.07□□□□□ -1.6
RDH11-204ENST00000553578 ATP7BP35670 1465 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 DISP3Q9P2K9 1392 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 MOXD2PA6NHM9 499 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 ADH1BP00325 375 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 TMEM51Q9NW97 253 aa5.07□□□□□ -1.6
RDH11-204ENST00000553578 MMP14P50281 582 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 PTCH1Q13635 1447 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 RALBP1Q15311 655 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 SNRKQ9NRH2 765 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 G3BP2Q9UN86 482 aaKnown RBP5.06□□□□□ -1.6
RDH11-204ENST00000553578 TRAIPQ9BWF2 469 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 SLC6A16Q9GZN6 736 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 CAMTA1Q9Y6Y1 1673 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 TLL1O43897 1013 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 MCCP23508 829 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 RIC3Q7Z5B4 369 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 ABCC11Q96J66 1382 aa5.06□□□□□ -1.6
RDH11-204ENST00000553578 NDUFV2P19404 249 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 ZBED9Q6R2W3 1325 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 POM121CA8CG34 1229 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 GUCA2AQ02747 115 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 CC2D1BQ5T0F9 858 aaKnown RBP5.05□□□□□ -1.6
RDH11-204ENST00000553578 PAF1Q8N7H5 531 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 TBC1D2BQ9UPU7 963 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 FMN2Q9NZ56 1722 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 CLK2P49760 499 aaKnown RBP5.05□□□□□ -1.6
RDH11-204ENST00000553578 WDR75Q8IWA0 830 aaKnown RBP5.05□□□□□ -1.6
RDH11-204ENST00000553578 NKX2-3Q8TAU0 364 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.05□□□□□ -1.6
RDH11-204ENST00000553578 ABCC6O95255 1503 aa5.05□□□□□ -1.6
RDH11-204ENST00000553578 PIK3R4Q99570 1358 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 SPDYE5A6NIY4 337 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 HLA-CQ95604 372 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 MYH16Q9H6N6 1097 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 FAM13BQ9NYF5 915 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 CPSF1Q10570 1443 aaKnown RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 CENPJQ9HC77 1338 aaPredicted RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 TPM2P07951 284 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 IFFO2Q5TF58 517 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 WDR78Q5VTH9 848 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 SMAP1Q8IYB5 467 aaPredicted RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 USB1Q9BQ65 265 aaKnown RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 MRS2Q9HD23 443 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 N4BP2Q86UW6 1770 aaPredicted RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 MYSM1Q5VVJ2 828 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 B4GALNT3Q6L9W6 998 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 PIK3R5Q8WYR1 880 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 ZNF622Q969S3 477 aaKnown RBP eCLIP5.04□□□□□ -1.6
RDH11-204ENST00000553578 TRIM44Q96DX7 344 aaPredicted RBP5.04□□□□□ -1.6
RDH11-204ENST00000553578 ZBTB3Q9H5J0 574 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 VRTNQ9H8Y1 702 aa5.04□□□□□ -1.6
RDH11-204ENST00000553578 POLR3AO14802 1390 aaPredicted RBP5.03□□□□□ -1.6
RDH11-204ENST00000553578 ADAMTS13Q76LX8 1427 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 YTHDC2Q9H6S0 1430 aaKnown RBP5.03□□□□□ -1.6
RDH11-204ENST00000553578 MTMR2Q13614 643 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 PPP4R4Q6NUP7 873 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 RSBN1LQ6PCB5 846 aaPredicted RBP5.03□□□□□ -1.6
RDH11-204ENST00000553578 NGEFQ8N5V2 710 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 PNPLA6Q8IY17 1366 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 PLEKHG1Q9ULL1 1385 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 SSH2Q76I76 1423 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 MARCH6O60337 910 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 ERCC5P28715 1186 aaPredicted RBP5.03□□□□□ -1.6
RDH11-204ENST00000553578 VAC14Q08AM6 782 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 BRICD5Q6PL45 260 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 RNF19BQ6ZMZ0 732 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 RETREG3Q86VR2 466 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 DEPDC4Q8N2C3 294 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 DCAF11Q8TEB1 546 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 ZNF521Q96K83 1311 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 hCG_2014768A0A024R1R8 64 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 A0A0G2JS52 829 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 SPTLC1O15269 473 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 S1PR4O95977 384 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 GJA5P36382 358 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 MKNK1Q9BUB5 465 aa5.03□□□□□ -1.6
RDH11-204ENST00000553578 MYBBP1AQ9BQG0 1328 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms