RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
APEX1-205ENST00000553555 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
APEX1-205ENST00000553555 TRIM37O94972 964 aa17.3■□□□□ 0.36
APEX1-205ENST00000553555 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
APEX1-205ENST00000553555 USP44Q9H0E7 712 aa17.3■□□□□ 0.36
APEX1-205ENST00000553555 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
APEX1-205ENST00000553555 GNAI3P08754 354 aa17.29■□□□□ 0.36
APEX1-205ENST00000553555 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
APEX1-205ENST00000553555 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
APEX1-205ENST00000553555 IGKV5-2P06315 115 aa17.29■□□□□ 0.36
APEX1-205ENST00000553555 LINC00116Q8NCU8 138 aa17.29■□□□□ 0.36
APEX1-205ENST00000553555 MYD88Q99836 296 aa17.29■□□□□ 0.36
APEX1-205ENST00000553555 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
APEX1-205ENST00000553555 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
APEX1-205ENST00000553555 NUP98P52948 1817 aa17.28■□□□□ 0.36
APEX1-205ENST00000553555 IBTKQ9P2D0 1353 aaPredicted RBP17.28■□□□□ 0.36
APEX1-205ENST00000553555 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
APEX1-205ENST00000553555 KCNQ4P56696 695 aa17.28■□□□□ 0.36
APEX1-205ENST00000553555 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
APEX1-205ENST00000553555 CWF19L2Q2TBE0 894 aaKnown RBP17.28■□□□□ 0.36
APEX1-205ENST00000553555 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
APEX1-205ENST00000553555 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
APEX1-205ENST00000553555 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
APEX1-205ENST00000553555 GNAI2P04899 355 aa17.26■□□□□ 0.35
APEX1-205ENST00000553555 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
APEX1-205ENST00000553555 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
APEX1-205ENST00000553555 MAP3K15Q6ZN16 1313 aa17.26■□□□□ 0.35
APEX1-205ENST00000553555 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
APEX1-205ENST00000553555 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 NPM2Q86SE8 214 aaKnown RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
APEX1-205ENST00000553555 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
APEX1-205ENST00000553555 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
APEX1-205ENST00000553555 EP400Q96L91 3159 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 ANKRD36CQ5JPF3 1778 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 GCKRQ14397 625 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 CEP85Q6P2H3 762 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
APEX1-205ENST00000553555 ARXQ96QS3 562 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 UTYO14607 1347 aa17.24■□□□□ 0.35
APEX1-205ENST00000553555 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
APEX1-205ENST00000553555 ATP5J2-PTCD1G3V325 749 aa17.23■□□□□ 0.35
APEX1-205ENST00000553555 TCIRG1Q13488 830 aa17.23■□□□□ 0.35
APEX1-205ENST00000553555 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
APEX1-205ENST00000553555 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
APEX1-205ENST00000553555 GRM8O00222 908 aa17.22■□□□□ 0.35
APEX1-205ENST00000553555 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
APEX1-205ENST00000553555 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
APEX1-205ENST00000553555 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
APEX1-205ENST00000553555 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
APEX1-205ENST00000553555 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
APEX1-205ENST00000553555 PLSCR1O15162 318 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 RPS6KA4O75676 772 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 HLFQ16534 295 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 HDAC5Q9UQL6 1122 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 TNS1Q9HBL0 1735 aaKnown RBP17.21■□□□□ 0.35
APEX1-205ENST00000553555 A0A087WZG4 1122 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 COL15A1P39059 1388 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 ATP8B2P98198 1209 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
APEX1-205ENST00000553555 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
APEX1-205ENST00000553555 APBA3O96018 575 aa17.2■□□□□ 0.34
APEX1-205ENST00000553555 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
APEX1-205ENST00000553555 CWC25Q9NXE8 425 aaPredicted RBP17.2■□□□□ 0.34
APEX1-205ENST00000553555 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
APEX1-205ENST00000553555 SMC5Q8IY18 1101 aa17.19■□□□□ 0.34
APEX1-205ENST00000553555 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
APEX1-205ENST00000553555 PROM2Q8N271 834 aa17.19■□□□□ 0.34
APEX1-205ENST00000553555 H7C1W4 665 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 TXNRD1Q16881 649 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 GNPATO15228 680 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 HMMRO75330 724 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 HMGB2P26583 209 aaKnown RBP17.18■□□□□ 0.34
APEX1-205ENST00000553555 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
APEX1-205ENST00000553555 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
APEX1-205ENST00000553555 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
APEX1-205ENST00000553555 CASP7P55210 303 aa17.17■□□□□ 0.34
APEX1-205ENST00000553555 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
APEX1-205ENST00000553555 DCTPP1Q9H773 170 aa17.17■□□□□ 0.34
APEX1-205ENST00000553555 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
APEX1-205ENST00000553555 PNMA6EA0A0J9YXQ4 647 aa17.16■□□□□ 0.34
APEX1-205ENST00000553555 ZNF34Q8IZ26 560 aa17.16■□□□□ 0.34
APEX1-205ENST00000553555 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
APEX1-205ENST00000553555 MTX1Q13505 466 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 SSH3Q8TE77 659 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 AK7Q96M32 723 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
APEX1-205ENST00000553555 RGL2O15211 777 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 GPTP24298 496 aa17.14■□□□□ 0.33
APEX1-205ENST00000553555 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms