RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
GCN1-208ENST00000551549 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
GCN1-208ENST00000551549 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
GCN1-208ENST00000551549 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
GCN1-208ENST00000551549 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 NFKBIEO00221 500 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 C21orf2O43822 256 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 MYL6BP14649 208 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
GCN1-208ENST00000551549 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 TTLL7Q6ZT98 887 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
GCN1-208ENST00000551549 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
GCN1-208ENST00000551549 RGL2O15211 777 aa12.79□□□□□ -0.36
GCN1-208ENST00000551549 SRGNP10124 158 aa12.79□□□□□ -0.36
GCN1-208ENST00000551549 LMOD3Q0VAK6 560 aa12.79□□□□□ -0.36
GCN1-208ENST00000551549 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
GCN1-208ENST00000551549 LMNB1P20700 586 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 BABAM1Q9NWV8 329 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 KDM3BQ7LBC6 1761 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
GCN1-208ENST00000551549 BCORQ6W2J9 1755 aa12.77□□□□□ -0.36
GCN1-208ENST00000551549 KLRG2A4D1S0 409 aaPredicted RBP12.77□□□□□ -0.37
GCN1-208ENST00000551549 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.37
GCN1-208ENST00000551549 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
GCN1-208ENST00000551549 PDIA6Q15084 440 aa12.77□□□□□ -0.37
GCN1-208ENST00000551549 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
GCN1-208ENST00000551549 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
GCN1-208ENST00000551549 ZBTB3Q9H5J0 574 aa12.77□□□□□ -0.37
GCN1-208ENST00000551549 CHL1O00533 1208 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 TOMM70O94826 608 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 ANXA1P04083 346 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 HSPA6P17066 643 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 GPTP24298 496 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 LRP10Q7Z4F1 713 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 RRAGCQ9HB90 399 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
GCN1-208ENST00000551549 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
GCN1-208ENST00000551549 COL11A2P13942 1736 aaPredicted RBP12.75□□□□□ -0.37
GCN1-208ENST00000551549 NPR1P16066 1061 aa12.75□□□□□ -0.37
GCN1-208ENST00000551549 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
GCN1-208ENST00000551549 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
GCN1-208ENST00000551549 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
GCN1-208ENST00000551549 C7orf43Q8WVR3 580 aa12.75□□□□□ -0.37
GCN1-208ENST00000551549 DLEC1Q9Y238 1755 aa12.75□□□□□ -0.37
GCN1-208ENST00000551549 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 UBN2Q6ZU65 1347 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 ZC3H4Q9UPT8 1303 aaKnown RBP12.74□□□□□ -0.37
GCN1-208ENST00000551549 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 SUSD4Q5VX71 490 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 OLFM4Q6UX06 510 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 NYXQ9GZU5 481 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 SBF1O95248 1867 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
GCN1-208ENST00000551549 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
GCN1-208ENST00000551549 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
GCN1-208ENST00000551549 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
GCN1-208ENST00000551549 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
GCN1-208ENST00000551549 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
GCN1-208ENST00000551549 APAF1O14727 1248 aa12.72□□□□□ -0.37
GCN1-208ENST00000551549 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
GCN1-208ENST00000551549 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
GCN1-208ENST00000551549 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
GCN1-208ENST00000551549 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
GCN1-208ENST00000551549 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
GCN1-208ENST00000551549 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 CCDC184Q52MB2 194 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 CCDC93Q567U6 631 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
GCN1-208ENST00000551549 NTSR2O95665 410 aa12.7□□□□□ -0.38
GCN1-208ENST00000551549 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
GCN1-208ENST00000551549 CFAP44Q96MT7 982 aa12.7□□□□□ -0.38
GCN1-208ENST00000551549 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
GCN1-208ENST00000551549 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
GCN1-208ENST00000551549 POTECB2RU33 542 aa12.69□□□□□ -0.38
GCN1-208ENST00000551549 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
GCN1-208ENST00000551549 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
GCN1-208ENST00000551549 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
GCN1-208ENST00000551549 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
GCN1-208ENST00000551549 UTP14AQ9BVJ6 771 aaKnown RBP12.69□□□□□ -0.38
GCN1-208ENST00000551549 ZNF277Q9NRM2 450 aaPredicted RBP12.69□□□□□ -0.38
GCN1-208ENST00000551549 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
GCN1-208ENST00000551549 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
GCN1-208ENST00000551549 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 HOXA10P31260 410 aaPredicted RBP12.68□□□□□ -0.38
GCN1-208ENST00000551549 APLP1P51693 650 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 FKBP4Q02790 459 aaKnown RBP eCLIP12.68□□□□□ -0.38
GCN1-208ENST00000551549 FSTL1Q12841 308 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms