RNA–Protein interactions for RNA: ENST00000551327.5

PXN-218, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-218ENST00000551327 CLEC4GQ6UXB4 293 aa11.68□□□□□ -0.54
PXN-218ENST00000551327 C16orf71Q8IYS4 520 aaPredicted RBP11.68□□□□□ -0.54
PXN-218ENST00000551327 ZNF496Q96IT1 587 aaPredicted RBP11.68□□□□□ -0.54
PXN-218ENST00000551327 KDM2BQ8NHM5 1336 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 KCNQ3O43525 872 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 SERPINB2P05120 415 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 FSTL1Q12841 308 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
PXN-218ENST00000551327 TBC1D9BQ66K14 1250 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 KDM3BQ7LBC6 1761 aa11.67□□□□□ -0.54
PXN-218ENST00000551327 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
PXN-218ENST00000551327 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
PXN-218ENST00000551327 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
PXN-218ENST00000551327 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
PXN-218ENST00000551327 PRAMEF22A3QJZ6 481 aa11.65□□□□□ -0.54
PXN-218ENST00000551327 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
PXN-218ENST00000551327 GLTPD2A6NH11 291 aa11.64□□□□□ -0.55
PXN-218ENST00000551327 C21orf2O43822 256 aa11.64□□□□□ -0.55
PXN-218ENST00000551327 LMNB1P20700 586 aa11.64□□□□□ -0.55
PXN-218ENST00000551327 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
PXN-218ENST00000551327 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
PXN-218ENST00000551327 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
PXN-218ENST00000551327 POLR2AP24928 1970 aaKnown RBP11.64□□□□□ -0.55
PXN-218ENST00000551327 ERBB4Q15303 1308 aa11.63□□□□□ -0.55
PXN-218ENST00000551327 MYBBP1AQ9BQG0 1328 aaKnown RBP11.63□□□□□ -0.55
PXN-218ENST00000551327 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
PXN-218ENST00000551327 CASP8AP2Q9UKL3 1982 aa11.63□□□□□ -0.55
PXN-218ENST00000551327 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
PXN-218ENST00000551327 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
PXN-218ENST00000551327 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
PXN-218ENST00000551327 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
PXN-218ENST00000551327 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
PXN-218ENST00000551327 A1BGP04217 495 aa11.62□□□□□ -0.55
PXN-218ENST00000551327 LMOD3Q0VAK6 560 aa11.62□□□□□ -0.55
PXN-218ENST00000551327 NCBP3Q53F19 620 aaKnown RBP11.62□□□□□ -0.55
PXN-218ENST00000551327 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
PXN-218ENST00000551327 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
PXN-218ENST00000551327 NPM2Q86SE8 214 aaKnown RBP11.61□□□□□ -0.55
PXN-218ENST00000551327 ZNF622Q969S3 477 aaKnown RBP eCLIP11.61□□□□□ -0.55
PXN-218ENST00000551327 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
PXN-218ENST00000551327 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
PXN-218ENST00000551327 KLRG2A4D1S0 409 aaPredicted RBP11.6□□□□□ -0.55
PXN-218ENST00000551327 ERVV-1B6SEH8 477 aa11.6□□□□□ -0.55
PXN-218ENST00000551327 CAMTA2O94983 1202 aa11.6□□□□□ -0.55
PXN-218ENST00000551327 VEGFAP15692 232 aaPredicted RBP11.6□□□□□ -0.55
PXN-218ENST00000551327 ZNF652Q9Y2D9 606 aa11.6□□□□□ -0.55
PXN-218ENST00000551327 PDE6BP35913 854 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 FMR1Q06787 632 aaKnown RBP eCLIP11.59□□□□□ -0.55
PXN-218ENST00000551327 MCM10Q7L590 875 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 TNRC18O15417 2968 aaPredicted RBP11.59□□□□□ -0.55
PXN-218ENST00000551327 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 COL4A1P02462 1669 aa11.59□□□□□ -0.55
PXN-218ENST00000551327 H0YIN7 160 aa11.58□□□□□ -0.56
PXN-218ENST00000551327 FOXN1O15353 648 aa11.58□□□□□ -0.56
PXN-218ENST00000551327 ERFEQ4G0M1 354 aa11.58□□□□□ -0.56
PXN-218ENST00000551327 PRPF40BQ6NWY9 871 aaKnown RBP11.58□□□□□ -0.56
PXN-218ENST00000551327 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
PXN-218ENST00000551327 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
PXN-218ENST00000551327 IBTKQ9P2D0 1353 aaPredicted RBP11.57□□□□□ -0.56
PXN-218ENST00000551327 HOXB7P09629 217 aa11.57□□□□□ -0.56
PXN-218ENST00000551327 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
PXN-218ENST00000551327 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
PXN-218ENST00000551327 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
PXN-218ENST00000551327 CHMP4AQ9BY43 222 aa11.57□□□□□ -0.56
PXN-218ENST00000551327 FAM177BA6PVY3 158 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 DDX10Q13206 875 aaKnown RBP11.56□□□□□ -0.56
PXN-218ENST00000551327 RIC1Q4ADV7 1423 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 SOGA3Q5TF21 947 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
PXN-218ENST00000551327 RUNDC1Q96C34 613 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 PASKQ96RG2 1323 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 LTBP3Q9NS15 1303 aa11.56□□□□□ -0.56
PXN-218ENST00000551327 DDX60Q8IY21 1712 aaKnown RBP11.55□□□□□ -0.56
PXN-218ENST00000551327 DCTN1Q14203 1278 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 TPTE2Q6XPS3 522 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
PXN-218ENST00000551327 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
PXN-218ENST00000551327 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 NBPF26B4DH59 902 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 CHL1O00533 1208 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 SRGNP10124 158 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 RIPK4P57078 832 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 NBPF10Q6P3W6 841 aaKnown RBP11.54□□□□□ -0.56
PXN-218ENST00000551327 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
PXN-218ENST00000551327 VEGFBP49765 207 aa11.53□□□□□ -0.56
PXN-218ENST00000551327 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
PXN-218ENST00000551327 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
PXN-218ENST00000551327 SPEF2Q9C093 1822 aa11.52□□□□□ -0.57
PXN-218ENST00000551327 ST5P78524 1137 aa11.52□□□□□ -0.57
PXN-218ENST00000551327 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms