RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 WDR43Q15061 677 aaKnown RBP eCLIP25.68■■□□□ 1.7
ATF1-202ENST00000549612 NBPF5PQ86XG9 351 aaPredicted RBP25.68■■□□□ 1.7
ATF1-202ENST00000549612 RNF181Q9P0P0 153 aa25.68■■□□□ 1.7
ATF1-202ENST00000549612 CCDC146Q8IYE0 955 aa25.67■■□□□ 1.7
ATF1-202ENST00000549612 RUNDC1Q96C34 613 aa25.67■■□□□ 1.7
ATF1-202ENST00000549612 ERBB4Q15303 1308 aa25.66■■□□□ 1.7
ATF1-202ENST00000549612 ZNF622Q969S3 477 aaKnown RBP eCLIP25.66■■□□□ 1.7
ATF1-202ENST00000549612 NIP7Q9Y221 180 aaKnown RBP eCLIP25.66■■□□□ 1.7
ATF1-202ENST00000549612 RASSF7Q02833 373 aa25.65■■□□□ 1.7
ATF1-202ENST00000549612 HLFQ16534 295 aa25.65■■□□□ 1.7
ATF1-202ENST00000549612 ADAMTS8Q9UP79 889 aa25.65■■□□□ 1.7
ATF1-202ENST00000549612 RRP7AQ9Y3A4 280 aaKnown RBP25.65■■□□□ 1.7
ATF1-202ENST00000549612 SBF1O95248 1867 aa25.64■■□□□ 1.7
ATF1-202ENST00000549612 ERVV-1B6SEH8 477 aa25.64■■□□□ 1.7
ATF1-202ENST00000549612 SRGNP10124 158 aa25.64■■□□□ 1.7
ATF1-202ENST00000549612 STYK1Q6J9G0 422 aa25.63■■□□□ 1.69
ATF1-202ENST00000549612 TPTE2Q6XPS3 522 aa25.63■■□□□ 1.69
ATF1-202ENST00000549612 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
ATF1-202ENST00000549612 ZC3H4Q9UPT8 1303 aaKnown RBP25.63■■□□□ 1.69
ATF1-202ENST00000549612 LMNB1P20700 586 aa25.62■■□□□ 1.69
ATF1-202ENST00000549612 NGEFQ8N5V2 710 aa25.62■■□□□ 1.69
ATF1-202ENST00000549612 CNKSR1Q969H4 720 aa25.62■■□□□ 1.69
ATF1-202ENST00000549612 TRIM35Q9UPQ4 493 aa25.62■■□□□ 1.69
ATF1-202ENST00000549612 NFKBIEO00221 500 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 MYL6BP14649 208 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 PRELPP51888 382 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 NEUROD2Q15784 382 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 KIF6Q6ZMV9 814 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 TTLL7Q6ZT98 887 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 MASTLQ96GX5 879 aa25.61■■□□□ 1.69
ATF1-202ENST00000549612 KLRG2A4D1S0 409 aaPredicted RBP25.6■■□□□ 1.69
ATF1-202ENST00000549612 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
ATF1-202ENST00000549612 NMRK2Q9NPI5 230 aa25.6■■□□□ 1.69
ATF1-202ENST00000549612 CEP350Q5VT06 3117 aa25.6■■□□□ 1.69
ATF1-202ENST00000549612 CHL1O00533 1208 aa25.59■■□□□ 1.69
ATF1-202ENST00000549612 C21orf2O43822 256 aa25.59■■□□□ 1.69
ATF1-202ENST00000549612 PRPF40BQ6NWY9 871 aaKnown RBP25.58■■□□□ 1.69
ATF1-202ENST00000549612 LRP10Q7Z4F1 713 aa25.58■■□□□ 1.69
ATF1-202ENST00000549612 KDM2BQ8NHM5 1336 aa25.58■■□□□ 1.69
ATF1-202ENST00000549612 PDIA6Q15084 440 aa25.57■■□□□ 1.68
ATF1-202ENST00000549612 ARFGEF2Q9Y6D5 1785 aa25.56■■□□□ 1.68
ATF1-202ENST00000549612 FAM177BA6PVY3 158 aa25.56■■□□□ 1.68
ATF1-202ENST00000549612 NPR1P16066 1061 aa25.56■■□□□ 1.68
ATF1-202ENST00000549612 ZBTB3Q9H5J0 574 aa25.56■■□□□ 1.68
ATF1-202ENST00000549612 NUP98P52948 1817 aa25.56■■□□□ 1.68
ATF1-202ENST00000549612 IBTKQ9P2D0 1353 aaPredicted RBP25.56■■□□□ 1.68
ATF1-202ENST00000549612 TOMM70O94826 608 aa25.55■■□□□ 1.68
ATF1-202ENST00000549612 EIF2S2P20042 333 aaKnown RBP25.55■■□□□ 1.68
ATF1-202ENST00000549612 NYXQ9GZU5 481 aa25.55■■□□□ 1.68
ATF1-202ENST00000549612 ZNF219Q9P2Y4 722 aaPredicted RBP25.55■■□□□ 1.68
ATF1-202ENST00000549612 SLX4Q8IY92 1834 aa25.55■■□□□ 1.68
ATF1-202ENST00000549612 LTBP3Q9NS15 1303 aa25.55■■□□□ 1.68
ATF1-202ENST00000549612 FER1L6Q2WGJ9 1857 aa25.54■■□□□ 1.68
ATF1-202ENST00000549612 HSPA6P17066 643 aa25.54■■□□□ 1.68
ATF1-202ENST00000549612 SOGA3Q5TF21 947 aa25.54■■□□□ 1.68
ATF1-202ENST00000549612 GIGYF2Q6Y7W6 1299 aaKnown RBP25.54■■□□□ 1.68
ATF1-202ENST00000549612 PROSER3Q2NL68 480 aa25.53■■□□□ 1.68
ATF1-202ENST00000549612 UBN2Q6ZU65 1347 aa25.53■■□□□ 1.68
ATF1-202ENST00000549612 ABCC12Q96J65 1359 aa25.53■■□□□ 1.68
ATF1-202ENST00000549612 GTF2E1P29083 439 aaPredicted RBP25.52■■□□□ 1.68
ATF1-202ENST00000549612 ZNF34Q8IZ26 560 aa25.52■■□□□ 1.68
ATF1-202ENST00000549612 C7orf43Q8WVR3 580 aa25.52■■□□□ 1.68
ATF1-202ENST00000549612 RIC1Q4ADV7 1423 aa25.52■■□□□ 1.68
ATF1-202ENST00000549612 TIAM2Q8IVF5 1701 aa25.51■■□□□ 1.68
ATF1-202ENST00000549612 TAOK3Q9H2K8 898 aa25.51■■□□□ 1.67
ATF1-202ENST00000549612 TNRC6CQ9HCJ0 1690 aaKnown RBP25.51■■□□□ 1.67
ATF1-202ENST00000549612 GLTPD2A6NH11 291 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 ANXA1P04083 346 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 GPTP24298 496 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 KRT24Q2M2I5 525 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 CRY2Q49AN0 593 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 NUTM1Q86Y26 1132 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 CFAP44Q96MT7 982 aa25.5■■□□□ 1.67
ATF1-202ENST00000549612 LAS1LQ9Y4W2 734 aaKnown RBP25.5■■□□□ 1.67
ATF1-202ENST00000549612 HOXB7P09629 217 aa25.49■■□□□ 1.67
ATF1-202ENST00000549612 ERFEQ4G0M1 354 aa25.49■■□□□ 1.67
ATF1-202ENST00000549612 SUSD4Q5VX71 490 aa25.49■■□□□ 1.67
ATF1-202ENST00000549612 RBM46Q8TBY0 533 aaKnown RBP25.49■■□□□ 1.67
ATF1-202ENST00000549612 CACNA1SQ13698 1873 aa25.49■■□□□ 1.67
ATF1-202ENST00000549612 NTSR2O95665 410 aa25.48■■□□□ 1.67
ATF1-202ENST00000549612 PARP10Q53GL7 1025 aa25.48■■□□□ 1.67
ATF1-202ENST00000549612 RRAGCQ9HB90 399 aa25.48■■□□□ 1.67
ATF1-202ENST00000549612 DDX21Q9NR30 783 aaKnown RBP eCLIP25.48■■□□□ 1.67
ATF1-202ENST00000549612 CCDC88AQ3V6T2 1871 aa25.47■■□□□ 1.67
ATF1-202ENST00000549612 APAF1O14727 1248 aa25.47■■□□□ 1.67
ATF1-202ENST00000549612 CCDC93Q567U6 631 aa25.47■■□□□ 1.67
ATF1-202ENST00000549612 C16orf71Q8IYS4 520 aaPredicted RBP25.47■■□□□ 1.67
ATF1-202ENST00000549612 NECTIN2Q92692 538 aa25.47■■□□□ 1.67
ATF1-202ENST00000549612 ALDH1B1P30837 517 aa25.46■■□□□ 1.67
ATF1-202ENST00000549612 COPS6Q7L5N1 327 aa25.46■■□□□ 1.67
ATF1-202ENST00000549612 ZNF853P0CG23 659 aa25.45■■□□□ 1.66
ATF1-202ENST00000549612 PPP1R42Q7Z4L9 355 aa25.45■■□□□ 1.66
ATF1-202ENST00000549612 XAGE3Q8WTP9 111 aa25.45■■□□□ 1.66
ATF1-202ENST00000549612 DICER1Q9UPY3 1922 aaKnown RBP25.45■■□□□ 1.66
ATF1-202ENST00000549612 HDGFL1Q5TGJ6 251 aa25.44■■□□□ 1.66
ATF1-202ENST00000549612 MBIPQ9NS73 344 aa25.44■■□□□ 1.66
ATF1-202ENST00000549612 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
ATF1-202ENST00000549612 CHPF2Q9P2E5 772 aa25.43■■□□□ 1.66
ATF1-202ENST00000549612 FKBP4Q02790 459 aaKnown RBP eCLIP25.42■■□□□ 1.66
ATF1-202ENST00000549612 CALD1Q05682 793 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms