RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
PRPF40B-209ENST00000548825 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
PRPF40B-209ENST00000548825 OSBPL3Q9H4L5 887 aa16.45■□□□□ 0.22
PRPF40B-209ENST00000548825 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
PRPF40B-209ENST00000548825 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
PRPF40B-209ENST00000548825 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 KDRP35968 1356 aa16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 HSP90B1P14625 803 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 PI4K2BQ8TCG2 481 aa16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 SGSM2O43147 1006 aa16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 GLRX3O76003 335 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 COL9A3Q14050 684 aaPredicted RBP16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
PRPF40B-209ENST00000548825 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 KDM4AO75164 1064 aa16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 RBM10P98175 930 aaKnown RBP16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 CCDC173Q0VFZ6 552 aa16.43■□□□□ 0.22
PRPF40B-209ENST00000548825 GRM8O00222 908 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 CAMK4Q16566 473 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 KSR2Q6VAB6 950 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 CLCN1P35523 988 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 FBXW7Q969H0 707 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 TFIP11Q9UBB9 837 aaKnown RBP16.42■□□□□ 0.22
PRPF40B-209ENST00000548825 ATF3P18847 181 aa16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 GJB2P29033 226 aa16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 RUFY2Q8WXA3 655 aa16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 ZNF496Q96IT1 587 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 STRN4Q9NRL3 753 aa16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 MCM2P49736 904 aa16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 DNM1Q05193 864 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
PRPF40B-209ENST00000548825 HSPA4P34932 840 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 USP25Q9UHP3 1055 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 SYT1P21579 422 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 LIMCH1Q9UPQ0 1083 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 C3P01024 1663 aa16.4■□□□□ 0.22
PRPF40B-209ENST00000548825 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 BRD1O95696 1058 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 CYP2E1P05181 493 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 STX6O43752 255 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 ADCY9O60503 1353 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 A0A087WZG4 1122 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 AMOTQ4VCS5 1084 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
PRPF40B-209ENST00000548825 SALL3Q9BXA9 1300 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 HSPA2P54652 639 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 ARHGEF25Q86VW2 580 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 RAD50Q92878 1312 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 A0A0D9SFI3 127 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 SPC24Q8NBT2 197 aa16.38■□□□□ 0.21
PRPF40B-209ENST00000548825 CABP4P57796 275 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 SASH1O94885 1247 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 LRSAM1Q6UWE0 723 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 ZSCAN30Q86W11 494 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 C17orf53Q8N3J3 647 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 SYAP1Q96A49 352 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 MBD3O95983 291 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 SETD1AO15047 1707 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-209ENST00000548825 POLA2Q14181 598 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 MON2Q7Z3U7 1717 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 SNRKQ9NRH2 765 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 FAM13BQ9NYF5 915 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 LINS1Q8NG48 757 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
PRPF40B-209ENST00000548825 TFCP2Q12800 502 aa16.35■□□□□ 0.21
PRPF40B-209ENST00000548825 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms