RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 RARSP54136 660 aaKnown RBP8.23□□□□□ -1.09
CASC18-202ENST00000548557 PDE3AQ14432 1141 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 ZNF496Q96IT1 587 aaPredicted RBP8.23□□□□□ -1.09
CASC18-202ENST00000548557 DOT1LQ8TEK3 1739 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 FTSJ3Q8IY81 847 aaKnown RBP8.23□□□□□ -1.09
CASC18-202ENST00000548557 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
CASC18-202ENST00000548557 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
CASC18-202ENST00000548557 KCNQ2O43526 872 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 FAM182BQ5T319 152 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 DDRGK1Q96HY6 314 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 DNAJC2Q99543 621 aaKnown RBP8.22□□□□□ -1.09
CASC18-202ENST00000548557 GZF1Q9H116 711 aaPredicted RBP8.22□□□□□ -1.09
CASC18-202ENST00000548557 ITGB4P16144 1822 aa8.22□□□□□ -1.09
CASC18-202ENST00000548557 PTMAP06454 111 aaKnown RBP8.22□□□□□ -1.09
CASC18-202ENST00000548557 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
CASC18-202ENST00000548557 PAPPAQ13219 1627 aa8.21□□□□□ -1.09
CASC18-202ENST00000548557 PTCD1O75127 700 aaKnown RBP8.21□□□□□ -1.1
CASC18-202ENST00000548557 RTL5Q5HYW3 569 aaPredicted RBP8.21□□□□□ -1.1
CASC18-202ENST00000548557 HDGFL1Q5TGJ6 251 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 STK31Q9BXU1 1019 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 BRWD3Q6RI45 1802 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 KCPQ6ZWJ8 1503 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 NHSQ6T4R5 1651 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 SSH1Q8WYL5 1049 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 SMC4Q9NTJ3 1288 aa8.21□□□□□ -1.1
CASC18-202ENST00000548557 UBR2Q8IWV8 1755 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 KIF16BQ96L93 1317 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 HMGB2P26583 209 aaKnown RBP8.2□□□□□ -1.1
CASC18-202ENST00000548557 CCDC125Q86Z20 511 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 DBF4Q9UBU7 674 aaPredicted RBP8.2□□□□□ -1.1
CASC18-202ENST00000548557 PALLDQ8WX93 1383 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 ERBB4Q15303 1308 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 IGHDP01880 384 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 CCDC82Q8N4S0 544 aa8.2□□□□□ -1.1
CASC18-202ENST00000548557 RBM42Q9BTD8 480 aaKnown RBP8.2□□□□□ -1.1
CASC18-202ENST00000548557 KAT6BQ8WYB5 2073 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 IPO8O15397 1037 aaKnown RBP8.19□□□□□ -1.1
CASC18-202ENST00000548557 STARD3NLO95772 234 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 EIF2S2P20042 333 aaKnown RBP8.19□□□□□ -1.1
CASC18-202ENST00000548557 SIK1P57059 783 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 IFNLR1Q8IU57 520 aaPredicted RBP8.19□□□□□ -1.1
CASC18-202ENST00000548557 ARHGAP45Q92619 1136 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 CLUAP1Q96AJ1 413 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 USP16Q9Y5T5 823 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 TRIM37O94972 964 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 RGS3P49796 1198 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 MRPL50Q8N5N7 158 aaKnown RBP8.19□□□□□ -1.1
CASC18-202ENST00000548557 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
CASC18-202ENST00000548557 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 PRAMEF22A3QJZ6 481 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
CASC18-202ENST00000548557 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 BCL2L13Q9BXK5 485 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
CASC18-202ENST00000548557 HYPKQ9NX55 129 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 PTPRCP08575 1304 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 ZNF831Q5JPB2 1677 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 PLSCR1O15162 318 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
CASC18-202ENST00000548557 EP400Q96L91 3159 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 ZKSCAN2Q63HK3 967 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 DNAJC10Q8IXB1 793 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 CHPF2Q9P2E5 772 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 BTAF1O14981 1849 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 CICQ96RK0 1608 aaPredicted RBP8.17□□□□□ -1.1
CASC18-202ENST00000548557 CYP19A1P11511 503 aaPredicted RBP8.17□□□□□ -1.1
CASC18-202ENST00000548557 PDIA6Q15084 440 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 ATF7IPQ6VMQ6 1270 aa8.17□□□□□ -1.1
CASC18-202ENST00000548557 FRAT1Q92837 279 aaPredicted RBP8.17□□□□□ -1.1
CASC18-202ENST00000548557 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
CASC18-202ENST00000548557 API5Q9BZZ5 524 aaKnown RBP8.16□□□□□ -1.1
CASC18-202ENST00000548557 LOC102724159A0A0B4J2E5 919 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 FLIIQ13045 1269 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 PWP2Q15269 919 aaKnown RBP8.15□□□□□ -1.1
CASC18-202ENST00000548557 HSP90AB4PQ58FF6 505 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 EXOC8Q8IYI6 725 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 CCNL1Q9UK58 526 aaPredicted RBP8.15□□□□□ -1.1
CASC18-202ENST00000548557 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 CACNA1FO60840 1977 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 APBA3O96018 575 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 RLBP1P12271 317 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 TNNQ9UQP3 1299 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 C5P01031 1676 aa8.15□□□□□ -1.1
CASC18-202ENST00000548557 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
CASC18-202ENST00000548557 A1BGP04217 495 aa8.14□□□□□ -1.11
CASC18-202ENST00000548557 TRIM27P14373 513 aa8.14□□□□□ -1.11
CASC18-202ENST00000548557 ITPK1Q13572 414 aa8.14□□□□□ -1.11
CASC18-202ENST00000548557 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
CASC18-202ENST00000548557 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
CASC18-202ENST00000548557 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
CASC18-202ENST00000548557 NBPF26B4DH59 902 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms