RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 SLIT2O94813 1529 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 MX1P20591 662 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 HSP90AB4PQ58FF6 505 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 KIF1BPQ96EK5 621 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 BCL11AQ9H165 835 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 BCL9O00512 1426 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 TJP1Q07157 1748 aa18.8■□□□□ 0.6
CALCOCO1-203ENST00000546443 EXOC5O00471 708 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 A1BGP04217 495 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 ATG3Q9NT62 314 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 BECN1Q14457 450 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 CDCA7Q9BWT1 371 aaPredicted RBP18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 ASAP1Q9ULH1 1129 aa18.79■□□□□ 0.6
CALCOCO1-203ENST00000546443 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
CALCOCO1-203ENST00000546443 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
CALCOCO1-203ENST00000546443 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
CALCOCO1-203ENST00000546443 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
CALCOCO1-203ENST00000546443 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.6
CALCOCO1-203ENST00000546443 CASP7P55210 303 aa18.76■□□□□ 0.59
CALCOCO1-203ENST00000546443 SPATA31A5Q5VU36 1347 aa18.75■□□□□ 0.59
CALCOCO1-203ENST00000546443 SPATA31A7Q8IWB4 1347 aa18.75■□□□□ 0.59
CALCOCO1-203ENST00000546443 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
CALCOCO1-203ENST00000546443 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
CALCOCO1-203ENST00000546443 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CALCOCO1-203ENST00000546443 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 DNAJC10Q8IXB1 793 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 ERC1Q8IUD2 1116 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 KIF2CQ99661 725 aa18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 PA2G4Q9UQ80 394 aaKnown RBP18.74■□□□□ 0.59
CALCOCO1-203ENST00000546443 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
CALCOCO1-203ENST00000546443 H7C1W4 665 aa18.73■□□□□ 0.59
CALCOCO1-203ENST00000546443 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
CALCOCO1-203ENST00000546443 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
CALCOCO1-203ENST00000546443 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
CALCOCO1-203ENST00000546443 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
CALCOCO1-203ENST00000546443 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
CALCOCO1-203ENST00000546443 A0A087WZG4 1122 aa18.71■□□□□ 0.59
CALCOCO1-203ENST00000546443 OS9Q13438 667 aaPredicted RBP18.71■□□□□ 0.59
CALCOCO1-203ENST00000546443 SLC4A9Q96Q91 983 aa18.71■□□□□ 0.59
CALCOCO1-203ENST00000546443 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
CALCOCO1-203ENST00000546443 SASH1O94885 1247 aa18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 DDB1Q16531 1140 aa18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 UBE3BQ7Z3V4 1068 aa18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 SNX21Q969T3 373 aa18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 CICQ96RK0 1608 aaPredicted RBP18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
CALCOCO1-203ENST00000546443 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 ISCA1Q9BUE6 129 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 ANKRD36CQ5JPF3 1778 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 ERC2O15083 957 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 STARD3NLO95772 234 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 PRIM1P49642 420 aaKnown RBP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 ZBTB3Q9H5J0 574 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 COPRSQ9NQ92 184 aa18.69■□□□□ 0.58
CALCOCO1-203ENST00000546443 JCADQ9P266 1359 aa18.68■□□□□ 0.58
CALCOCO1-203ENST00000546443 CYP19A1P11511 503 aaPredicted RBP18.68■□□□□ 0.58
CALCOCO1-203ENST00000546443 CHMLP26374 656 aa18.68■□□□□ 0.58
CALCOCO1-203ENST00000546443 MARCH10Q8NA82 808 aaPredicted RBP18.68■□□□□ 0.58
CALCOCO1-203ENST00000546443 RREB1Q92766 1687 aa18.67■□□□□ 0.58
CALCOCO1-203ENST00000546443 FOXO4P98177 505 aa18.67■□□□□ 0.58
CALCOCO1-203ENST00000546443 RILPL2Q969X0 211 aa18.67■□□□□ 0.58
CALCOCO1-203ENST00000546443 ESYT1Q9BSJ8 1104 aa18.67■□□□□ 0.58
CALCOCO1-203ENST00000546443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.67■□□□□ 0.58
CALCOCO1-203ENST00000546443 TRIM6-TRIM34B2RNG4 842 aa18.66■□□□□ 0.58
CALCOCO1-203ENST00000546443 REC8O95072 547 aa18.66■□□□□ 0.58
CALCOCO1-203ENST00000546443 PTPN12Q05209 780 aaKnown RBP18.66■□□□□ 0.58
CALCOCO1-203ENST00000546443 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
CALCOCO1-203ENST00000546443 BCL9LQ86UU0 1499 aa18.66■□□□□ 0.58
CALCOCO1-203ENST00000546443 TRIM28Q13263 835 aaKnown RBP18.65■□□□□ 0.58
CALCOCO1-203ENST00000546443 KAT6BQ8WYB5 2073 aa18.65■□□□□ 0.58
CALCOCO1-203ENST00000546443 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.58
CALCOCO1-203ENST00000546443 KLHDC4Q8TBB5 520 aa18.64■□□□□ 0.58
CALCOCO1-203ENST00000546443 ANTXR1Q9H6X2 564 aa18.64■□□□□ 0.58
CALCOCO1-203ENST00000546443 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.58
CALCOCO1-203ENST00000546443 MAP3K15Q6ZN16 1313 aa18.64■□□□□ 0.57
CALCOCO1-203ENST00000546443 KIF6Q6ZMV9 814 aa18.64■□□□□ 0.57
CALCOCO1-203ENST00000546443 AACSQ86V21 672 aa18.64■□□□□ 0.57
CALCOCO1-203ENST00000546443 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
CALCOCO1-203ENST00000546443 SYTL4Q96C24 671 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms