RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
TMEM258-208ENST00000545210 ST5P78524 1137 aa15.55■□□□□ 0.08
TMEM258-208ENST00000545210 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
TMEM258-208ENST00000545210 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
TMEM258-208ENST00000545210 SOGA3Q5TF21 947 aa15.54■□□□□ 0.08
TMEM258-208ENST00000545210 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
TMEM258-208ENST00000545210 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
TMEM258-208ENST00000545210 MASTLQ96GX5 879 aa15.54■□□□□ 0.08
TMEM258-208ENST00000545210 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
TMEM258-208ENST00000545210 TAF1DQ9H5J8 278 aaPredicted RBP15.54■□□□□ 0.08
TMEM258-208ENST00000545210 VEGFBP49765 207 aa15.53■□□□□ 0.08
TMEM258-208ENST00000545210 L3MBTL3Q96JM7 780 aaPredicted RBP15.53■□□□□ 0.08
TMEM258-208ENST00000545210 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
TMEM258-208ENST00000545210 COL3A1P02461 1466 aaPredicted RBP15.52■□□□□ 0.08
TMEM258-208ENST00000545210 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
TMEM258-208ENST00000545210 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.08
TMEM258-208ENST00000545210 DZIP3Q86Y13 1208 aaKnown RBP15.52■□□□□ 0.08
TMEM258-208ENST00000545210 AIDAQ96BJ3 306 aa15.52■□□□□ 0.08
TMEM258-208ENST00000545210 PRDM10Q9NQV6 1147 aa15.52■□□□□ 0.08
TMEM258-208ENST00000545210 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
TMEM258-208ENST00000545210 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
TMEM258-208ENST00000545210 U2SURPO15042 1029 aaKnown RBP15.51■□□□□ 0.07
TMEM258-208ENST00000545210 ITGBL1O95965 494 aaPredicted RBP15.51■□□□□ 0.07
TMEM258-208ENST00000545210 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
TMEM258-208ENST00000545210 CTCFP49711 727 aaPredicted RBP15.51■□□□□ 0.07
TMEM258-208ENST00000545210 C7orf43Q8WVR3 580 aa15.51■□□□□ 0.07
TMEM258-208ENST00000545210 KCNQ3O43525 872 aa15.5■□□□□ 0.07
TMEM258-208ENST00000545210 CCDC93Q567U6 631 aa15.5■□□□□ 0.07
TMEM258-208ENST00000545210 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
TMEM258-208ENST00000545210 NBPF5PQ86XG9 351 aaPredicted RBP15.5■□□□□ 0.07
TMEM258-208ENST00000545210 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
TMEM258-208ENST00000545210 ZNF277Q9NRM2 450 aaPredicted RBP15.5■□□□□ 0.07
TMEM258-208ENST00000545210 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
TMEM258-208ENST00000545210 KIF7Q2M1P5 1343 aa15.49■□□□□ 0.07
TMEM258-208ENST00000545210 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
TMEM258-208ENST00000545210 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
TMEM258-208ENST00000545210 USP16Q9Y5T5 823 aa15.49■□□□□ 0.07
TMEM258-208ENST00000545210 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
TMEM258-208ENST00000545210 BTBD11A6QL63 1104 aa15.48■□□□□ 0.07
TMEM258-208ENST00000545210 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
TMEM258-208ENST00000545210 NPR1P16066 1061 aa15.48■□□□□ 0.07
TMEM258-208ENST00000545210 LBX1P52954 281 aa15.48■□□□□ 0.07
TMEM258-208ENST00000545210 WBP1LQ9NX94 342 aa15.48■□□□□ 0.07
TMEM258-208ENST00000545210 TRPM7Q96QT4 1865 aa15.48■□□□□ 0.07
TMEM258-208ENST00000545210 NUP98P52948 1817 aa15.47■□□□□ 0.07
TMEM258-208ENST00000545210 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
TMEM258-208ENST00000545210 EPHX2P34913 555 aa15.47■□□□□ 0.07
TMEM258-208ENST00000545210 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
TMEM258-208ENST00000545210 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
TMEM258-208ENST00000545210 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
TMEM258-208ENST00000545210 MAP1SQ66K74 1059 aaPredicted RBP15.46■□□□□ 0.07
TMEM258-208ENST00000545210 RTKN2Q8IZC4 609 aa15.46■□□□□ 0.07
TMEM258-208ENST00000545210 PHACTR3Q96KR7 559 aa15.46■□□□□ 0.07
TMEM258-208ENST00000545210 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
TMEM258-208ENST00000545210 LAMB4A4D0S4 1761 aa15.46■□□□□ 0.07
TMEM258-208ENST00000545210 LTBP1Q14766 1721 aa15.46■□□□□ 0.06
TMEM258-208ENST00000545210 KLRG2A4D1S0 409 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-208ENST00000545210 RASSF10A6NK89 507 aa15.45■□□□□ 0.06
TMEM258-208ENST00000545210 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
TMEM258-208ENST00000545210 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
TMEM258-208ENST00000545210 TPTE2Q6XPS3 522 aa15.45■□□□□ 0.06
TMEM258-208ENST00000545210 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-208ENST00000545210 CNTROBQ8N137 903 aa15.45■□□□□ 0.06
TMEM258-208ENST00000545210 NIP7Q9Y221 180 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMEM258-208ENST00000545210 THSD7BQ9C0I4 1608 aa15.44■□□□□ 0.06
TMEM258-208ENST00000545210 FZD9O00144 591 aa15.44■□□□□ 0.06
TMEM258-208ENST00000545210 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
TMEM258-208ENST00000545210 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
TMEM258-208ENST00000545210 HSPA8P11142 646 aaKnown RBP15.43■□□□□ 0.06
TMEM258-208ENST00000545210 PRKAR2BP31323 418 aa15.43■□□□□ 0.06
TMEM258-208ENST00000545210 GPC2Q8N158 579 aa15.43■□□□□ 0.06
TMEM258-208ENST00000545210 SYNE4Q8N205 404 aa15.43■□□□□ 0.06
TMEM258-208ENST00000545210 ABT1Q9ULW3 272 aaKnown RBP15.43■□□□□ 0.06
TMEM258-208ENST00000545210 COL4A5P29400 1685 aa15.43■□□□□ 0.06
TMEM258-208ENST00000545210 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
TMEM258-208ENST00000545210 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
TMEM258-208ENST00000545210 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
TMEM258-208ENST00000545210 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
TMEM258-208ENST00000545210 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
TMEM258-208ENST00000545210 ABHD8Q96I13 439 aa15.42■□□□□ 0.06
TMEM258-208ENST00000545210 DLG5Q8TDM6 1919 aa15.42■□□□□ 0.06
TMEM258-208ENST00000545210 MAP2K1Q02750 393 aaPredicted RBP15.41■□□□□ 0.06
TMEM258-208ENST00000545210 MCM10Q7L590 875 aa15.41■□□□□ 0.06
TMEM258-208ENST00000545210 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
TMEM258-208ENST00000545210 GTF2E1P29083 439 aaPredicted RBP15.4■□□□□ 0.06
TMEM258-208ENST00000545210 HLFQ16534 295 aa15.4■□□□□ 0.06
TMEM258-208ENST00000545210 FAM161AQ3B820 660 aa15.4■□□□□ 0.06
TMEM258-208ENST00000545210 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
TMEM258-208ENST00000545210 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
TMEM258-208ENST00000545210 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM258-208ENST00000545210 GJA3Q9Y6H8 435 aa15.4■□□□□ 0.06
TMEM258-208ENST00000545210 FMR1Q06787 632 aaKnown RBP eCLIP15.39■□□□□ 0.057e-9■■■□□ 17.5
TMEM258-208ENST00000545210 PSMD1Q99460 953 aa15.39■□□□□ 0.05
TMEM258-208ENST00000545210 ABCC12Q96J65 1359 aa15.38■□□□□ 0.05
TMEM258-208ENST00000545210 NPC1L1Q9UHC9 1359 aa15.38■□□□□ 0.05
TMEM258-208ENST00000545210 RGL2O15211 777 aa15.38■□□□□ 0.05
TMEM258-208ENST00000545210 GRM1Q13255 1194 aa15.38■□□□□ 0.05
TMEM258-208ENST00000545210 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
TMEM258-208ENST00000545210 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
TMEM258-208ENST00000545210 KDM3BQ7LBC6 1761 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms