RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MLLT1Q03111 559 aaPredicted RBP21.67■■□□□ 1.06
DDX55-212ENST00000544738 ZNF330Q9Y3S2 320 aaPredicted RBP21.67■■□□□ 1.06
DDX55-212ENST00000544738 STARD3NLO95772 234 aa21.66■■□□□ 1.06
DDX55-212ENST00000544738 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
DDX55-212ENST00000544738 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
DDX55-212ENST00000544738 MAP2K1Q02750 393 aaPredicted RBP21.65■■□□□ 1.06
DDX55-212ENST00000544738 TEFQ10587 303 aa21.65■■□□□ 1.06
DDX55-212ENST00000544738 PRPF40BQ6NWY9 871 aaKnown RBP21.65■■□□□ 1.06
DDX55-212ENST00000544738 VSIG10Q8N0Z9 540 aa21.65■■□□□ 1.06
DDX55-212ENST00000544738 L3MBTL3Q96JM7 780 aaPredicted RBP21.65■■□□□ 1.06
DDX55-212ENST00000544738 WDR33Q9C0J8 1336 aaKnown RBP21.64■■□□□ 1.05
DDX55-212ENST00000544738 SOGA3Q5TF21 947 aa21.64■■□□□ 1.05
DDX55-212ENST00000544738 DICER1Q9UPY3 1922 aaKnown RBP21.63■■□□□ 1.05
DDX55-212ENST00000544738 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 MAP1SQ66K74 1059 aaPredicted RBP21.63■■□□□ 1.05
DDX55-212ENST00000544738 STYK1Q6J9G0 422 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 TTC5Q8N0Z6 440 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 HACL1Q9UJ83 578 aa21.63■■□□□ 1.05
DDX55-212ENST00000544738 ABT1Q9ULW3 272 aaKnown RBP21.63■■□□□ 1.05
DDX55-212ENST00000544738 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
DDX55-212ENST00000544738 RASSF10A6NK89 507 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
DDX55-212ENST00000544738 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
DDX55-212ENST00000544738 CNBD1Q8NA66 436 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 IL17REQ8NFR9 667 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 SETDB2Q96T68 719 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
DDX55-212ENST00000544738 SRGNP10124 158 aa21.61■■□□□ 1.05
DDX55-212ENST00000544738 EPHX2P34913 555 aa21.61■■□□□ 1.05
DDX55-212ENST00000544738 MASTLQ96GX5 879 aa21.61■■□□□ 1.05
DDX55-212ENST00000544738 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
DDX55-212ENST00000544738 ST5P78524 1137 aa21.6■■□□□ 1.05
DDX55-212ENST00000544738 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
DDX55-212ENST00000544738 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
DDX55-212ENST00000544738 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
DDX55-212ENST00000544738 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
DDX55-212ENST00000544738 BEGAINQ9BUH8 593 aa21.59■■□□□ 1.05
DDX55-212ENST00000544738 GRM1Q13255 1194 aa21.58■■□□□ 1.05
DDX55-212ENST00000544738 CCDC93Q567U6 631 aa21.58■■□□□ 1.05
DDX55-212ENST00000544738 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
DDX55-212ENST00000544738 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
DDX55-212ENST00000544738 CFAP44Q96MT7 982 aa21.58■■□□□ 1.05
DDX55-212ENST00000544738 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
DDX55-212ENST00000544738 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.04
DDX55-212ENST00000544738 SLX4Q8IY92 1834 aa21.57■■□□□ 1.04
DDX55-212ENST00000544738 RGS19P49795 217 aa21.57■■□□□ 1.04
DDX55-212ENST00000544738 CEMIPQ8WUJ3 1361 aa21.57■■□□□ 1.04
DDX55-212ENST00000544738 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
DDX55-212ENST00000544738 C7orf43Q8WVR3 580 aa21.56■■□□□ 1.04
DDX55-212ENST00000544738 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
DDX55-212ENST00000544738 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.04
DDX55-212ENST00000544738 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
DDX55-212ENST00000544738 ZNF496Q96IT1 587 aaPredicted RBP21.55■■□□□ 1.04
DDX55-212ENST00000544738 SCN4AP35499 1836 aa21.55■■□□□ 1.04
DDX55-212ENST00000544738 A1BGP04217 495 aa21.54■■□□□ 1.04
DDX55-212ENST00000544738 IL6STP40189 918 aaPredicted RBP21.54■■□□□ 1.04
DDX55-212ENST00000544738 OLFM4Q6UX06 510 aa21.54■■□□□ 1.04
DDX55-212ENST00000544738 DDX21Q9NR30 783 aaKnown RBP eCLIP21.54■■□□□ 1.04
DDX55-212ENST00000544738 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 COL11A2P13942 1736 aaPredicted RBP21.53■■□□□ 1.04
DDX55-212ENST00000544738 CAMTA2O94983 1202 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 NEFMP07197 916 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 CAPNS2Q96L46 248 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
DDX55-212ENST00000544738 FMNL2Q96PY5 1086 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 TSKSQ9UJT2 592 aa21.53■■□□□ 1.04
DDX55-212ENST00000544738 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
DDX55-212ENST00000544738 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
DDX55-212ENST00000544738 CYP4F22Q6NT55 531 aa21.52■■□□□ 1.04
DDX55-212ENST00000544738 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
DDX55-212ENST00000544738 SIPA1L3O60292 1781 aaPredicted RBP21.51■■□□□ 1.03
DDX55-212ENST00000544738 NPR1P16066 1061 aa21.51■■□□□ 1.03
DDX55-212ENST00000544738 ECE1P42892 770 aa21.51■■□□□ 1.03
DDX55-212ENST00000544738 FMR1Q06787 632 aaKnown RBP eCLIP21.51■■□□□ 1.03
DDX55-212ENST00000544738 RTKN2Q8IZC4 609 aa21.51■■□□□ 1.03
DDX55-212ENST00000544738 DZIP3Q86Y13 1208 aaKnown RBP21.5■■□□□ 1.03
DDX55-212ENST00000544738 SYNE4Q8N205 404 aa21.5■■□□□ 1.03
DDX55-212ENST00000544738 GJA3Q9Y6H8 435 aa21.5■■□□□ 1.03
DDX55-212ENST00000544738 FZD9O00144 591 aa21.49■■□□□ 1.03
DDX55-212ENST00000544738 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
DDX55-212ENST00000544738 GPC2Q8N158 579 aa21.49■■□□□ 1.03
DDX55-212ENST00000544738 MCM10Q7L590 875 aa21.48■■□□□ 1.03
DDX55-212ENST00000544738 PNNQ9H307 717 aaKnown RBP21.48■■□□□ 1.03
DDX55-212ENST00000544738 CACNA1SQ13698 1873 aa21.47■■□□□ 1.03
DDX55-212ENST00000544738 JDP2Q8WYK2 163 aa21.47■■□□□ 1.03
DDX55-212ENST00000544738 FAM177BA6PVY3 158 aa21.46■■□□□ 1.03
DDX55-212ENST00000544738 AOC2O75106 756 aa21.46■■□□□ 1.03
DDX55-212ENST00000544738 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
DDX55-212ENST00000544738 PIP4K2AP48426 406 aaPredicted RBP21.46■■□□□ 1.03
DDX55-212ENST00000544738 RALBP1Q15311 655 aa21.46■■□□□ 1.03
DDX55-212ENST00000544738 KCNQ3O43525 872 aa21.45■■□□□ 1.02
DDX55-212ENST00000544738 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
DDX55-212ENST00000544738 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
DDX55-212ENST00000544738 TRAF5O00463 557 aa21.44■■□□□ 1.02
DDX55-212ENST00000544738 CST9Q5W186 159 aa21.44■■□□□ 1.02
DDX55-212ENST00000544738 TPTE2Q6XPS3 522 aa21.44■■□□□ 1.02
DDX55-212ENST00000544738 KLRG2A4D1S0 409 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms