RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 MUM1L1Q5H9M0 696 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 TM6SF1Q9BZW5 370 aa21.59■■□□□ 1.05
CCT4-204ENST00000544079 KDM4FA0A1W2PPD8 638 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 GNAI3P08754 354 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 LIG1P18858 919 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCT4-204ENST00000544079 CCDC144BQ3MJ40 725 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 CCDC144CPQ8IYA2 1237 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 L2HGDHQ9H9P8 463 aa21.58■■□□□ 1.05
CCT4-204ENST00000544079 FEZ2Q9UHY8 353 aaPredicted RBP21.58■■□□□ 1.05
CCT4-204ENST00000544079 ZNF165P49910 485 aa21.58■■□□□ 1.04
CCT4-204ENST00000544079 HNRNPH2P55795 449 aaKnown RBP21.58■■□□□ 1.04
CCT4-204ENST00000544079 TPRNQ4KMQ1 711 aa21.58■■□□□ 1.04
CCT4-204ENST00000544079 UNC5CLQ8IV45 518 aa21.58■■□□□ 1.04
CCT4-204ENST00000544079 EFCC1Q9HA90 598 aa21.57■■□□□ 1.04
CCT4-204ENST00000544079 PDCP20941 246 aa21.57■■□□□ 1.04
CCT4-204ENST00000544079 TEX35Q5T0J7 233 aa21.57■■□□□ 1.04
CCT4-204ENST00000544079 IL25Q9H293 177 aa21.57■■□□□ 1.04
CCT4-204ENST00000544079 CRYBG1Q9Y4K1 1723 aa21.56■■□□□ 1.04
CCT4-204ENST00000544079 DACT1Q9NYF0 836 aa21.56■■□□□ 1.04
CCT4-204ENST00000544079 FHOD1Q9Y613 1164 aa21.56■■□□□ 1.04
CCT4-204ENST00000544079 CCAR2Q8N163 923 aaKnown RBP21.55■■□□□ 1.04
CCT4-204ENST00000544079 TXLNBQ8N3L3 684 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 N4BP2Q86UW6 1770 aaPredicted RBP21.55■■□□□ 1.04
CCT4-204ENST00000544079 MINK1Q8N4C8 1332 aaPredicted RBP21.55■■□□□ 1.04
CCT4-204ENST00000544079 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 KCNB2Q92953 911 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 CABP1Q9NZU7 370 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 ITSN1Q15811 1721 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 CFAP65Q6ZU64 1925 aaKnown RBP21.55■■□□□ 1.04
CCT4-204ENST00000544079 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
CCT4-204ENST00000544079 ATP8B1O43520 1251 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 SKILP12757 684 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 TPM4P67936 248 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 CAMK4Q16566 473 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 RASEFQ8IZ41 740 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
CCT4-204ENST00000544079 VPS37CA5D8V6 355 aaPredicted RBP21.53■■□□□ 1.04
CCT4-204ENST00000544079 LARGE1O95461 756 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 CCZ1BP86790 482 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 CCZ1P86791 482 aaPredicted RBP21.53■■□□□ 1.04
CCT4-204ENST00000544079 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 CKAP2LQ8IYA6 745 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 CDK19Q9BWU1 502 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
CCT4-204ENST00000544079 GOLGA6L4A6NEF3 574 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 USP27XA6NNY8 438 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 RAD51AP2Q09MP3 1159 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 ZSWIM6Q9HCJ5 1215 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 PDRG1Q9NUG6 133 aa21.53■■□□□ 1.04
CCT4-204ENST00000544079 SETD1AO15047 1707 aaKnown RBP21.52■■□□□ 1.04
CCT4-204ENST00000544079 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 RAB11FIP3O75154 756 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 GSDMDP57764 484 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 DHX8Q14562 1220 aaKnown RBP21.52■■□□□ 1.04
CCT4-204ENST00000544079 IQCB1Q15051 598 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 PRAM1Q96QH2 718 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 ST7Q9NRC1 585 aa21.52■■□□□ 1.04
CCT4-204ENST00000544079 GOLGA6L19H0YKK7 550 aa21.52■■□□□ 1.03
CCT4-204ENST00000544079 CASTP20810 708 aaKnown RBP21.52■■□□□ 1.03
CCT4-204ENST00000544079 KCNJ6P48051 423 aa21.52■■□□□ 1.03
CCT4-204ENST00000544079 PNMA6AP0CW24 399 aaPredicted RBP21.51■■□□□ 1.03
CCT4-204ENST00000544079 CCDC93Q567U6 631 aa21.51■■□□□ 1.03
CCT4-204ENST00000544079 FILIP1Q7Z7B0 1213 aa21.51■■□□□ 1.03
CCT4-204ENST00000544079 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.51■■□□□ 1.03
CCT4-204ENST00000544079 V9GYY5 206 aaPredicted RBP21.51■■□□□ 1.03
CCT4-204ENST00000544079 GIGYF1O75420 1035 aaPredicted RBP21.5■■□□□ 1.03
CCT4-204ENST00000544079 LARP1BQ659C4 914 aaKnown RBP21.5■■□□□ 1.03
CCT4-204ENST00000544079 CNTROBQ8N137 903 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 DNAJC25Q9H1X3 360 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 ARGLU1Q9NWB6 273 aaPredicted RBP21.5■■□□□ 1.03
CCT4-204ENST00000544079 CCDC69A6NI79 296 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 ZRANB2O95218 330 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCT4-204ENST00000544079 PLA2G4AP47712 749 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 IRX3P78415 501 aaPredicted RBP21.5■■□□□ 1.03
CCT4-204ENST00000544079 SPATA32Q96LK8 384 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 STK26Q9P289 416 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 CYP46A1Q9Y6A2 500 aa21.5■■□□□ 1.03
CCT4-204ENST00000544079 DLC1Q96QB1 1528 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 CLCN6P51797 869 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 PI4K2BQ8TCG2 481 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 YY1AP1Q9H869 796 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 XRN1Q8IZH2 1706 aaKnown RBP21.49■■□□□ 1.03
CCT4-204ENST00000544079 ST3GAL1Q11201 340 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 SLC4A10Q6U841 1118 aa21.49■■□□□ 1.03
CCT4-204ENST00000544079 SOS1Q07889 1333 aaPredicted RBP21.49■■□□□ 1.03
CCT4-204ENST00000544079 CRB1P82279 1406 aa21.48■■□□□ 1.03
CCT4-204ENST00000544079 CTAGE5O15320 804 aa21.48■■□□□ 1.03
CCT4-204ENST00000544079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.48■■□□□ 1.03
CCT4-204ENST00000544079 LEO1Q8WVC0 666 aaPredicted RBP21.48■■□□□ 1.03
CCT4-204ENST00000544079 UBXN6Q9BZV1 441 aa21.48■■□□□ 1.03
CCT4-204ENST00000544079 IMPACTQ9P2X3 320 aa21.48■■□□□ 1.03
CCT4-204ENST00000544079 PXDNLA1KZ92 1463 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms