RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
CELF1-221ENST00000543178 E9PSI1 815 aa12.26□□□□□ -0.45
CELF1-221ENST00000543178 MYL6BP14649 208 aa12.26□□□□□ -0.45
CELF1-221ENST00000543178 CCDC30Q5VVM6 783 aa12.26□□□□□ -0.45
CELF1-221ENST00000543178 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
CELF1-221ENST00000543178 HYPKQ9NX55 129 aa12.26□□□□□ -0.45
CELF1-221ENST00000543178 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 TGFB2P61812 414 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
CELF1-221ENST00000543178 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 TTLL7Q6ZT98 887 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
CELF1-221ENST00000543178 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
CELF1-221ENST00000543178 VAMP4O75379 141 aa12.24□□□□□ -0.45
CELF1-221ENST00000543178 SERPINB2P05120 415 aa12.24□□□□□ -0.45
CELF1-221ENST00000543178 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
CELF1-221ENST00000543178 GIGYF2Q6Y7W6 1299 aaKnown RBP12.24□□□□□ -0.45
CELF1-221ENST00000543178 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
CELF1-221ENST00000543178 TRMT2AQ8IZ69 625 aaKnown RBP12.24□□□□□ -0.45
CELF1-221ENST00000543178 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
CELF1-221ENST00000543178 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
CELF1-221ENST00000543178 ANXA1P04083 346 aa12.23□□□□□ -0.45
CELF1-221ENST00000543178 EXOSC9Q06265 439 aaKnown RBP12.23□□□□□ -0.45
CELF1-221ENST00000543178 HLFQ16534 295 aa12.23□□□□□ -0.45
CELF1-221ENST00000543178 HSP90AB3PQ58FF7 597 aa12.23□□□□□ -0.45
CELF1-221ENST00000543178 NECTIN2Q92692 538 aa12.23□□□□□ -0.45
CELF1-221ENST00000543178 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 NLGN2Q8NFZ4 835 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 PLBD2Q8NHP8 589 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 XAGE3Q8WTP9 111 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 ANKRD31Q8N7Z5 1873 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
CELF1-221ENST00000543178 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
CELF1-221ENST00000543178 ARFGEF2Q9Y6D5 1785 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 PARP10Q53GL7 1025 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 BICDL1Q6ZP65 573 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 ANKRD13DQ6ZTN6 518 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
CELF1-221ENST00000543178 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.45
CELF1-221ENST00000543178 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.46
CELF1-221ENST00000543178 TCIRG1Q13488 830 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 TPTE2Q6XPS3 522 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 NYXQ9GZU5 481 aa12.2□□□□□ -0.46
CELF1-221ENST00000543178 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
CELF1-221ENST00000543178 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
CELF1-221ENST00000543178 DDX58O95786 925 aaKnown RBP12.19□□□□□ -0.46
CELF1-221ENST00000543178 CT47B1P0C2W7 299 aaPredicted RBP12.19□□□□□ -0.46
CELF1-221ENST00000543178 AIMP1Q12904 312 aaKnown RBP12.19□□□□□ -0.46
CELF1-221ENST00000543178 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
CELF1-221ENST00000543178 CNBD1Q8NA66 436 aa12.19□□□□□ -0.46
CELF1-221ENST00000543178 PHAXQ9H814 394 aaKnown RBP12.19□□□□□ -0.46
CELF1-221ENST00000543178 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
CELF1-221ENST00000543178 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 KLRG2A4D1S0 409 aaPredicted RBP12.18□□□□□ -0.46
CELF1-221ENST00000543178 SLC4A2P04920 1241 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 KCNA3P22001 575 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 PDE6BP35913 854 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 ST5P78524 1137 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
CELF1-221ENST00000543178 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
CELF1-221ENST00000543178 ZBED9Q6R2W3 1325 aa12.17□□□□□ -0.46
CELF1-221ENST00000543178 DPEP1P16444 411 aa12.17□□□□□ -0.46
CELF1-221ENST00000543178 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
CELF1-221ENST00000543178 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
CELF1-221ENST00000543178 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
CELF1-221ENST00000543178 CHD4Q14839 1912 aa12.17□□□□□ -0.46
CELF1-221ENST00000543178 A0A0G2JLW4 131 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 NTSR2O95665 410 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 PIM2Q9P1W9 311 aa12.16□□□□□ -0.46
CELF1-221ENST00000543178 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
CELF1-221ENST00000543178 UTRNP46939 3433 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
CELF1-221ENST00000543178 H0YIN7 160 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 GPTP24298 496 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 FLIIQ13045 1269 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 G2E3Q7L622 706 aa12.15□□□□□ -0.46
CELF1-221ENST00000543178 METTL22Q9BUU2 404 aaPredicted RBP12.15□□□□□ -0.46
CELF1-221ENST00000543178 UTP14AQ9BVJ6 771 aaKnown RBP12.15□□□□□ -0.46
CELF1-221ENST00000543178 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
CELF1-221ENST00000543178 NPHP1O15259 732 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms