RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 NBPF15Q8N660 670 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 C10orf71Q711Q0 1435 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
TNFRSF1A-214ENST00000543048 LAMB4A4D0S4 1761 aa12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 ANP32CO43423 234 aa12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 CAMTA2O94983 1202 aa12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 BICDL1Q6ZP65 573 aa12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
TNFRSF1A-214ENST00000543048 NUP98P52948 1817 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 KCNA3P22001 575 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 TBC1D9BQ66K14 1250 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 CLEC4GQ6UXB4 293 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
TNFRSF1A-214ENST00000543048 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
TNFRSF1A-214ENST00000543048 CHL1O00533 1208 aa12.73□□□□□ -0.37
TNFRSF1A-214ENST00000543048 CCDC184Q52MB2 194 aa12.73□□□□□ -0.37
TNFRSF1A-214ENST00000543048 BCORQ6W2J9 1755 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 APAF1O14727 1248 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 RGL2O15211 777 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
TNFRSF1A-214ENST00000543048 CHRNA5P30532 468 aa12.71□□□□□ -0.37
TNFRSF1A-214ENST00000543048 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
TNFRSF1A-214ENST00000543048 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
TNFRSF1A-214ENST00000543048 ZNF784Q8NCA9 323 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF1A-214ENST00000543048 EIF2S2P20042 333 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
TNFRSF1A-214ENST00000543048 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
TNFRSF1A-214ENST00000543048 PDZRN3Q9UPQ7 1066 aa12.7□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 H0YIN7 160 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 MYL6BP14649 208 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 PDE6BP35913 854 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CALD1Q05682 793 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 HLFQ16534 295 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 PRR5LQ6MZQ0 368 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CCDC88AQ3V6T2 1871 aa12.69□□□□□ -0.38
TNFRSF1A-214ENST00000543048 SBF1O95248 1867 aa12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 NPHP1O15259 732 aa12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 TPTE2Q6XPS3 522 aa12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 GNAI1P63096 354 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ST5P78524 1137 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 PDIA6Q15084 440 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 NBPF5PQ86XG9 351 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 TTLL6Q8N841 843 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CNBD1Q8NA66 436 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
TNFRSF1A-214ENST00000543048 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
TNFRSF1A-214ENST00000543048 NECTIN2Q92692 538 aa12.66□□□□□ -0.38
TNFRSF1A-214ENST00000543048 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
TNFRSF1A-214ENST00000543048 HOXB7P09629 217 aa12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 ZNF622Q969S3 477 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 DDX21Q9NR30 783 aaKnown RBP eCLIP12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
TNFRSF1A-214ENST00000543048 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 GTF2E1P29083 439 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
TNFRSF1A-214ENST00000543048 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ANXA1P04083 346 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 DUSP27Q5VZP5 1158 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 ZNF34Q8IZ26 560 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
TNFRSF1A-214ENST00000543048 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-214ENST00000543048 SRGNP10124 158 aa12.62□□□□□ -0.39
TNFRSF1A-214ENST00000543048 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-214ENST00000543048 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms