RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
LDHA-220ENST00000542179 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 AFF2P51816 1311 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 ATRNO75882 1429 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 UBR2Q8IWV8 1755 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 SNRPA1P09661 255 aaKnown RBP11.75□□□□□ -0.53
LDHA-220ENST00000542179 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
LDHA-220ENST00000542179 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
LDHA-220ENST00000542179 TMOD3Q9NYL9 352 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 TRPC5Q9UL62 973 aaPredicted RBP11.75□□□□□ -0.53
LDHA-220ENST00000542179 DDX19BQ9UMR2 479 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 COG6Q9Y2V7 657 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 STK24Q9Y6E0 443 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 ABCC4O15439 1325 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 THSD7AQ9UPZ6 1657 aa11.75□□□□□ -0.53
LDHA-220ENST00000542179 STK25O00506 426 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
LDHA-220ENST00000542179 MARCH10Q8NA82 808 aaPredicted RBP11.74□□□□□ -0.53
LDHA-220ENST00000542179 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
LDHA-220ENST00000542179 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
LDHA-220ENST00000542179 BCL9O00512 1426 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 RGS12O14924 1447 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 GLI3P10071 1580 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 ITGB4P16144 1822 aa11.74□□□□□ -0.53
LDHA-220ENST00000542179 LCE2DQ5TA82 110 aaPredicted RBP11.73□□□□□ -0.53
LDHA-220ENST00000542179 INTS3Q68E01 1043 aaKnown RBP11.73□□□□□ -0.53
LDHA-220ENST00000542179 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
LDHA-220ENST00000542179 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
LDHA-220ENST00000542179 PIGBQ92521 554 aa11.73□□□□□ -0.53
LDHA-220ENST00000542179 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
LDHA-220ENST00000542179 RGL2O15211 777 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 EIF2S2P20042 333 aaKnown RBP11.72□□□□□ -0.53
LDHA-220ENST00000542179 FLIIQ13045 1269 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 G2E3Q7L622 706 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
LDHA-220ENST00000542179 C5P01031 1676 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 TEX13AQ9BXU3 409 aaPredicted RBP11.71□□□□□ -0.53
LDHA-220ENST00000542179 DDX21Q9NR30 783 aaKnown RBP eCLIP11.71□□□□□ -0.53
LDHA-220ENST00000542179 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
LDHA-220ENST00000542179 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
LDHA-220ENST00000542179 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 ZBTB7BO15156 539 aaPredicted RBP11.7□□□□□ -0.54
LDHA-220ENST00000542179 ST18O60284 1047 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
LDHA-220ENST00000542179 PDIA6Q15084 440 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 ITPRIPQ8IWB1 547 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 QTRT2Q9H974 415 aaKnown RBP11.7□□□□□ -0.54
LDHA-220ENST00000542179 ZBTB40Q9NUA8 1239 aa11.7□□□□□ -0.54
LDHA-220ENST00000542179 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
LDHA-220ENST00000542179 FKBP5Q13451 457 aaPredicted RBP11.69□□□□□ -0.54
LDHA-220ENST00000542179 ZNF772Q68DY9 489 aaPredicted RBP11.69□□□□□ -0.54
LDHA-220ENST00000542179 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
LDHA-220ENST00000542179 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
LDHA-220ENST00000542179 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
LDHA-220ENST00000542179 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
LDHA-220ENST00000542179 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
LDHA-220ENST00000542179 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
LDHA-220ENST00000542179 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
LDHA-220ENST00000542179 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 F6X3S4 739 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
LDHA-220ENST00000542179 DDX58O95786 925 aaKnown RBP11.66□□□□□ -0.54
LDHA-220ENST00000542179 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 SMARCC1Q92922 1105 aaPredicted RBP11.66□□□□□ -0.54
LDHA-220ENST00000542179 SYTL4Q96C24 671 aaPredicted RBP11.66□□□□□ -0.54
LDHA-220ENST00000542179 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
LDHA-220ENST00000542179 IBTKQ9P2D0 1353 aaPredicted RBP11.66□□□□□ -0.54
LDHA-220ENST00000542179 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
LDHA-220ENST00000542179 A0A0G2JS52 829 aa11.65□□□□□ -0.54
LDHA-220ENST00000542179 STARD3NLO95772 234 aa11.65□□□□□ -0.54
LDHA-220ENST00000542179 ANXA1P04083 346 aa11.65□□□□□ -0.54
LDHA-220ENST00000542179 RBM6P78332 1123 aaKnown RBP11.65□□□□□ -0.54
LDHA-220ENST00000542179 MYT1Q01538 1121 aa11.65□□□□□ -0.54
LDHA-220ENST00000542179 CENPQQ7L2Z9 268 aaPredicted RBP11.65□□□□□ -0.54
LDHA-220ENST00000542179 ADCY9O60503 1353 aa11.65□□□□□ -0.55
LDHA-220ENST00000542179 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.55
LDHA-220ENST00000542179 PI4KAP2A4QPH2 592 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 HDAC1Q13547 482 aaPredicted RBP11.64□□□□□ -0.55
LDHA-220ENST00000542179 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
LDHA-220ENST00000542179 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 PI4KAP1Q8N8J0 262 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 DNAAF4Q8WXU2 420 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 ACSBG1Q96GR2 724 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 MS4A4AQ96JQ5 239 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
LDHA-220ENST00000542179 NHSQ6T4R5 1651 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms