RNA–Protein interactions for RNA: ENST00000541419.1

AC079949.1-201, humanhuman

TSL 3 BASIC

Gene AC079949.1, Length 505 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079949.1-201ENST00000541419 PRDM10Q9NQV6 1147 aa17.41■□□□□ 0.38
AC079949.1-201ENST00000541419 SCN4AP35499 1836 aa17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 ITGBL1O95965 494 aaPredicted RBP17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 ST5P78524 1137 aa17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
AC079949.1-201ENST00000541419 ARFGEF2Q9Y6D5 1785 aa17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 KCNQ3O43525 872 aa17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
AC079949.1-201ENST00000541419 NPHP1O15259 732 aa17.38■□□□□ 0.37
AC079949.1-201ENST00000541419 VEGFBP49765 207 aa17.38■□□□□ 0.37
AC079949.1-201ENST00000541419 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
AC079949.1-201ENST00000541419 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
AC079949.1-201ENST00000541419 TMEM88BA6NKF7 163 aa17.37■□□□□ 0.37
AC079949.1-201ENST00000541419 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
AC079949.1-201ENST00000541419 CC2D1BQ5T0F9 858 aaKnown RBP17.37■□□□□ 0.37
AC079949.1-201ENST00000541419 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
AC079949.1-201ENST00000541419 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
AC079949.1-201ENST00000541419 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
AC079949.1-201ENST00000541419 WBP1LQ9NX94 342 aa17.36■□□□□ 0.37
AC079949.1-201ENST00000541419 KLRG2A4D1S0 409 aaPredicted RBP17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 ZNF277Q9NRM2 450 aaPredicted RBP17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 BCORQ6W2J9 1755 aa17.35■□□□□ 0.37
AC079949.1-201ENST00000541419 BTBD11A6QL63 1104 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 NPR1P16066 1061 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 EAPPQ56P03 285 aaPredicted RBP17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
AC079949.1-201ENST00000541419 COL3A1P02461 1466 aaPredicted RBP17.33■□□□□ 0.37
AC079949.1-201ENST00000541419 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
AC079949.1-201ENST00000541419 CLEC11AQ9Y240 323 aa17.33■□□□□ 0.36
AC079949.1-201ENST00000541419 EPHX2P34913 555 aa17.32■□□□□ 0.36
AC079949.1-201ENST00000541419 LBX1P52954 281 aa17.32■□□□□ 0.36
AC079949.1-201ENST00000541419 CNTROBQ8N137 903 aa17.32■□□□□ 0.36
AC079949.1-201ENST00000541419 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
AC079949.1-201ENST00000541419 ADAMTSL1Q8N6G6 1762 aa17.31■□□□□ 0.36
AC079949.1-201ENST00000541419 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
AC079949.1-201ENST00000541419 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
AC079949.1-201ENST00000541419 RTKN2Q8IZC4 609 aa17.31■□□□□ 0.36
AC079949.1-201ENST00000541419 FZD9O00144 591 aa17.3■□□□□ 0.36
AC079949.1-201ENST00000541419 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
AC079949.1-201ENST00000541419 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
AC079949.1-201ENST00000541419 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
AC079949.1-201ENST00000541419 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
AC079949.1-201ENST00000541419 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 NIP7Q9Y221 180 aaKnown RBP eCLIP17.29■□□□□ 0.36
AC079949.1-201ENST00000541419 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
AC079949.1-201ENST00000541419 RGL2O15211 777 aa17.28■□□□□ 0.36
AC079949.1-201ENST00000541419 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 PRKAR2BP31323 418 aa17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 GPC2Q8N158 579 aa17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 RSPH6AQ9H0K4 717 aa17.27■□□□□ 0.36
AC079949.1-201ENST00000541419 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
AC079949.1-201ENST00000541419 HLFQ16534 295 aa17.26■□□□□ 0.35
AC079949.1-201ENST00000541419 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
AC079949.1-201ENST00000541419 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
AC079949.1-201ENST00000541419 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
AC079949.1-201ENST00000541419 ABHD8Q96I13 439 aa17.25■□□□□ 0.35
AC079949.1-201ENST00000541419 MCM10Q7L590 875 aa17.24■□□□□ 0.35
AC079949.1-201ENST00000541419 PSMD1Q99460 953 aa17.24■□□□□ 0.35
AC079949.1-201ENST00000541419 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
AC079949.1-201ENST00000541419 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
AC079949.1-201ENST00000541419 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
AC079949.1-201ENST00000541419 JDP2Q8WYK2 163 aa17.23■□□□□ 0.35
AC079949.1-201ENST00000541419 SLC34A2O95436 690 aa17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 CRY2Q49AN0 593 aa17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 GJA3Q9Y6H8 435 aa17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 COL4A5P29400 1685 aa17.22■□□□□ 0.35
AC079949.1-201ENST00000541419 LTBP1Q14766 1721 aa17.21■□□□□ 0.35
AC079949.1-201ENST00000541419 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
AC079949.1-201ENST00000541419 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
AC079949.1-201ENST00000541419 RTF1Q92541 710 aaKnown RBP17.21■□□□□ 0.35
AC079949.1-201ENST00000541419 TRPM7Q96QT4 1865 aa17.2■□□□□ 0.34
AC079949.1-201ENST00000541419 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
AC079949.1-201ENST00000541419 NUP98P52948 1817 aa17.2■□□□□ 0.34
AC079949.1-201ENST00000541419 EPS15P42566 896 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms