RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ARXQ96QS3 562 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 HYPKQ9NX55 129 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 TBC1D2BQ9UPU7 963 aa25.04■■□□□ 1.6
DDX55-207ENST00000540763 KIF13BQ9NQT8 1826 aa25.03■■□□□ 1.6
DDX55-207ENST00000540763 ERVV-1B6SEH8 477 aa25.03■■□□□ 1.6
DDX55-207ENST00000540763 PROSER3Q2NL68 480 aa25.03■■□□□ 1.6
DDX55-207ENST00000540763 BCL2L12Q9HB09 334 aa25.03■■□□□ 1.6
DDX55-207ENST00000540763 AFDNP55196 1824 aaKnown RBP25.02■■□□□ 1.6
DDX55-207ENST00000540763 VAMP4O75379 141 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 FKBP8Q14318 412 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 KIF6Q6ZMV9 814 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 CDCA7LQ96GN5 454 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 ZNF652Q9Y2D9 606 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 MAP3K15Q6ZN16 1313 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 CHD4Q14839 1912 aa25.02■■□□□ 1.6
DDX55-207ENST00000540763 ARFGEF2Q9Y6D5 1785 aa25.01■■□□□ 1.59
DDX55-207ENST00000540763 STK31Q9BXU1 1019 aa25■■□□□ 1.59
DDX55-207ENST00000540763 ANXA1P04083 346 aa24.99■■□□□ 1.59
DDX55-207ENST00000540763 MMP10P09238 476 aa24.99■■□□□ 1.59
DDX55-207ENST00000540763 TM4SF1P30408 202 aa24.99■■□□□ 1.59
DDX55-207ENST00000540763 ZNF428Q96B54 188 aa24.99■■□□□ 1.59
DDX55-207ENST00000540763 ATP10DQ9P241 1426 aa24.98■■□□□ 1.59
DDX55-207ENST00000540763 CT47B1P0C2W7 299 aaPredicted RBP24.98■■□□□ 1.59
DDX55-207ENST00000540763 TTLL7Q6ZT98 887 aa24.98■■□□□ 1.59
DDX55-207ENST00000540763 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
DDX55-207ENST00000540763 XAGE3Q8WTP9 111 aa24.97■■□□□ 1.59
DDX55-207ENST00000540763 CARMIL3Q8ND23 1372 aa24.95■■□□□ 1.59
DDX55-207ENST00000540763 NFIXQ14938 502 aa24.95■■□□□ 1.58
DDX55-207ENST00000540763 GIGYF2Q6Y7W6 1299 aaKnown RBP24.95■■□□□ 1.58
DDX55-207ENST00000540763 PARP3Q9Y6F1 533 aa24.95■■□□□ 1.58
DDX55-207ENST00000540763 UTRNP46939 3433 aa24.95■■□□□ 1.58
DDX55-207ENST00000540763 POLRMTO00411 1230 aaKnown RBP24.94■■□□□ 1.58
DDX55-207ENST00000540763 TBC1D9BQ66K14 1250 aa24.94■■□□□ 1.58
DDX55-207ENST00000540763 DDR1Q08345 913 aa24.93■■□□□ 1.58
DDX55-207ENST00000540763 ZNF784Q8NCA9 323 aaPredicted RBP24.93■■□□□ 1.58
DDX55-207ENST00000540763 PLBD2Q8NHP8 589 aa24.93■■□□□ 1.58
DDX55-207ENST00000540763 ZBTB3Q9H5J0 574 aa24.93■■□□□ 1.58
DDX55-207ENST00000540763 C10orf71Q711Q0 1435 aa24.93■■□□□ 1.58
DDX55-207ENST00000540763 AIMP1Q12904 312 aaKnown RBP24.92■■□□□ 1.58
DDX55-207ENST00000540763 HLFQ16534 295 aa24.92■■□□□ 1.58
DDX55-207ENST00000540763 HSP90AB3PQ58FF7 597 aa24.92■■□□□ 1.58
DDX55-207ENST00000540763 SLC4A2P04920 1241 aa24.91■■□□□ 1.58
DDX55-207ENST00000540763 ANKRD13DQ6ZTN6 518 aa24.91■■□□□ 1.58
DDX55-207ENST00000540763 SETDB2Q96T68 719 aa24.91■■□□□ 1.58
DDX55-207ENST00000540763 PHAXQ9H814 394 aaKnown RBP24.91■■□□□ 1.58
DDX55-207ENST00000540763 IBTKQ9P2D0 1353 aaPredicted RBP24.91■■□□□ 1.58
DDX55-207ENST00000540763 KIAA1551Q9HCM1 1747 aa24.9■■□□□ 1.58
DDX55-207ENST00000540763 DDX58O95786 925 aaKnown RBP24.9■■□□□ 1.58
DDX55-207ENST00000540763 KLHL34Q8N239 644 aa24.9■■□□□ 1.58
DDX55-207ENST00000540763 ALDH1L2Q3SY69 923 aa24.89■■□□□ 1.58
DDX55-207ENST00000540763 CD2APQ9Y5K6 639 aa24.89■■□□□ 1.58
DDX55-207ENST00000540763 SERPINB2P05120 415 aa24.88■■□□□ 1.57
DDX55-207ENST00000540763 GPR162Q16538 588 aa24.88■■□□□ 1.57
DDX55-207ENST00000540763 NIP7Q9Y221 180 aaKnown RBP eCLIP24.88■■□□□ 1.57
DDX55-207ENST00000540763 ANKRD31Q8N7Z5 1873 aa24.87■■□□□ 1.57
DDX55-207ENST00000540763 FLIIQ13045 1269 aa24.87■■□□□ 1.57
DDX55-207ENST00000540763 BICDL1Q6ZP65 573 aa24.87■■□□□ 1.57
DDX55-207ENST00000540763 ZNF34Q8IZ26 560 aa24.87■■□□□ 1.57
DDX55-207ENST00000540763 DLEC1Q9Y238 1755 aa24.87■■□□□ 1.57
DDX55-207ENST00000540763 TCERG1O14776 1098 aaKnown RBP24.86■■□□□ 1.57
DDX55-207ENST00000540763 TCIRG1Q13488 830 aa24.86■■□□□ 1.57
DDX55-207ENST00000540763 PARP10Q53GL7 1025 aa24.86■■□□□ 1.57
DDX55-207ENST00000540763 BRCA1P38398 1863 aaKnown RBP24.85■■□□□ 1.57
DDX55-207ENST00000540763 KSR2Q6VAB6 950 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 G2E3Q7L622 706 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 RIC3Q7Z5B4 369 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 NYXQ9GZU5 481 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 RNF123Q5XPI4 1314 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 UBN2Q6ZU65 1347 aa24.84■■□□□ 1.57
DDX55-207ENST00000540763 ADCY9O60503 1353 aa24.83■■□□□ 1.57
DDX55-207ENST00000540763 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
DDX55-207ENST00000540763 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
DDX55-207ENST00000540763 TRIM28Q13263 835 aaKnown RBP24.82■■□□□ 1.56
DDX55-207ENST00000540763 RIC1Q4ADV7 1423 aa24.82■■□□□ 1.56
DDX55-207ENST00000540763 NBPF5PQ86XG9 351 aaPredicted RBP24.82■■□□□ 1.56
DDX55-207ENST00000540763 CNBD1Q8NA66 436 aa24.82■■□□□ 1.56
DDX55-207ENST00000540763 SSH1Q8WYL5 1049 aa24.82■■□□□ 1.56
DDX55-207ENST00000540763 LAMB2P55268 1798 aa24.82■■□□□ 1.56
DDX55-207ENST00000540763 FKBP5Q13451 457 aaPredicted RBP24.81■■□□□ 1.56
DDX55-207ENST00000540763 PRR5LQ6MZQ0 368 aa24.81■■□□□ 1.56
DDX55-207ENST00000540763 TPTE2Q6XPS3 522 aa24.81■■□□□ 1.56
DDX55-207ENST00000540763 PPP1R42Q7Z4L9 355 aa24.81■■□□□ 1.56
DDX55-207ENST00000540763 PELP1Q8IZL8 1130 aaKnown RBP24.81■■□□□ 1.56
DDX55-207ENST00000540763 MRPL50Q8N5N7 158 aaKnown RBP24.81■■□□□ 1.56
DDX55-207ENST00000540763 ISCA1Q9BUE6 129 aa24.81■■□□□ 1.56
DDX55-207ENST00000540763 METTL22Q9BUU2 404 aaPredicted RBP24.81■■□□□ 1.56
DDX55-207ENST00000540763 PI4KAP2A4QPH2 592 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 TGFB2P61812 414 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 ST5P78524 1137 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 PI4KAP1Q8N8J0 262 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 PXDNLA1KZ92 1463 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 PTPRCP08575 1304 aa24.8■■□□□ 1.56
DDX55-207ENST00000540763 GPTP24298 496 aa24.79■■□□□ 1.56
DDX55-207ENST00000540763 NLRP10Q86W26 655 aa24.79■■□□□ 1.56
DDX55-207ENST00000540763 NLGN2Q8NFZ4 835 aa24.79■■□□□ 1.56
DDX55-207ENST00000540763 SMC4Q9NTJ3 1288 aa24.79■■□□□ 1.56
DDX55-207ENST00000540763 MAP3K2Q9Y2U5 619 aa24.79■■□□□ 1.56
DDX55-207ENST00000540763 COL11A2P13942 1736 aaPredicted RBP24.78■■□□□ 1.56
DDX55-207ENST00000540763 NTSR2O95665 410 aa24.78■■□□□ 1.56
DDX55-207ENST00000540763 RARSP54136 660 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms