RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 OCLNQ16625 522 aa9.17□□□□□ -0.94
MRE11-209ENST00000540013 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
MRE11-209ENST00000540013 RIPOR1Q6ZS17 1223 aa9.17□□□□□ -0.94
MRE11-209ENST00000540013 ZDHHC1Q8WTX9 485 aa9.17□□□□□ -0.94
MRE11-209ENST00000540013 COL26A1Q96A83 441 aa9.17□□□□□ -0.94
MRE11-209ENST00000540013 MSX1P28360 303 aa9.16□□□□□ -0.94
MRE11-209ENST00000540013 TRIM22Q8IYM9 498 aa9.16□□□□□ -0.94
MRE11-209ENST00000540013 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
MRE11-209ENST00000540013 CRISPLD1Q9H336 500 aa9.16□□□□□ -0.94
MRE11-209ENST00000540013 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
MRE11-209ENST00000540013 ARSJQ5FYB0 599 aaPredicted RBP9.15□□□□□ -0.94
MRE11-209ENST00000540013 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
MRE11-209ENST00000540013 BICDL1Q6ZP65 573 aa9.15□□□□□ -0.94
MRE11-209ENST00000540013 PARP3Q9Y6F1 533 aa9.15□□□□□ -0.94
MRE11-209ENST00000540013 H3BM21 787 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 ATP4AP20648 1035 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 FIGNL1Q6PIW4 674 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 NLRP8Q86W28 1048 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 NANOS1Q8WY41 292 aaKnown RBP9.14□□□□□ -0.95
MRE11-209ENST00000540013 GPAMQ9HCL2 828 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 ANKIB1Q9P2G1 1089 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 GJA3Q9Y6H8 435 aa9.14□□□□□ -0.95
MRE11-209ENST00000540013 LGR5O75473 907 aa9.13□□□□□ -0.95
MRE11-209ENST00000540013 RTN1Q16799 776 aa9.13□□□□□ -0.95
MRE11-209ENST00000540013 ALDH16A1Q8IZ83 802 aa9.13□□□□□ -0.95
MRE11-209ENST00000540013 PHACTR1Q9C0D0 580 aa9.13□□□□□ -0.95
MRE11-209ENST00000540013 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
MRE11-209ENST00000540013 USP35Q9P2H5 1018 aa9.13□□□□□ -0.95
MRE11-209ENST00000540013 SSFA2P28290 1259 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 TXLNAP40222 546 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 KCNA1Q09470 495 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
MRE11-209ENST00000540013 SV2AQ7L0J3 742 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 IRF7Q92985 503 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 HCN4Q9Y3Q4 1203 aa9.12□□□□□ -0.95
MRE11-209ENST00000540013 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
MRE11-209ENST00000540013 A0A1W2PNR3 127 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 CDC14CA4D256 554 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 VSIG8P0DPA2 414 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 SH3PXD2AQ5TCZ1 1133 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 MYO19Q96H55 970 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 NGLY1Q96IV0 654 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 TRERF1Q96PN7 1200 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 ZIC5Q96T25 663 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 PHF24Q9UPV7 400 aa9.1□□□□□ -0.95
MRE11-209ENST00000540013 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
MRE11-209ENST00000540013 ZNF837Q96EG3 531 aaPredicted RBP9.09□□□□□ -0.95
MRE11-209ENST00000540013 BRD1O95696 1058 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 DBN1Q16643 649 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 C16orf46Q6P387 395 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 CHMP4AQ9BY43 222 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 SLAIN2Q9P270 581 aa9.08□□□□□ -0.96
MRE11-209ENST00000540013 VEGFBP49765 207 aa9.07□□□□□ -0.96
MRE11-209ENST00000540013 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
MRE11-209ENST00000540013 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
MRE11-209ENST00000540013 NCAPD3P42695 1498 aa9.07□□□□□ -0.96
MRE11-209ENST00000540013 ATAD2BQ9ULI0 1458 aa9.07□□□□□ -0.96
MRE11-209ENST00000540013 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
MRE11-209ENST00000540013 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
MRE11-209ENST00000540013 C11orf91Q3C1V1 193 aa9.06□□□□□ -0.96
MRE11-209ENST00000540013 IER5Q5VY09 327 aa9.06□□□□□ -0.96
MRE11-209ENST00000540013 CFHR5Q9BXR6 569 aa9.06□□□□□ -0.96
MRE11-209ENST00000540013 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
MRE11-209ENST00000540013 CUEDC1Q9NWM3 386 aaPredicted RBP9.06□□□□□ -0.96
MRE11-209ENST00000540013 PCDHGC4Q9Y5F7 938 aa9.06□□□□□ -0.96
MRE11-209ENST00000540013 SMARCA2P51531 1590 aa9.06□□□□□ -0.96
MRE11-209ENST00000540013 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
MRE11-209ENST00000540013 C7orf43Q8WVR3 580 aa9.05□□□□□ -0.96
MRE11-209ENST00000540013 SUSD3Q96L08 255 aa9.05□□□□□ -0.96
MRE11-209ENST00000540013 ATXN7L1Q9ULK2 861 aaPredicted RBP9.05□□□□□ -0.96
MRE11-209ENST00000540013 TGFBR3LH3BV60 316 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
MRE11-209ENST00000540013 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 CCER1Q8TC90 406 aaPredicted RBP9.04□□□□□ -0.96
MRE11-209ENST00000540013 GTPBP3Q969Y2 492 aaKnown RBP9.04□□□□□ -0.96
MRE11-209ENST00000540013 ZCCHC2Q9C0B9 1178 aaKnown RBP9.04□□□□□ -0.96
MRE11-209ENST00000540013 HMGXB3Q12766 1538 aa9.04□□□□□ -0.96
MRE11-209ENST00000540013 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
MRE11-209ENST00000540013 DGKZQ13574 1117 aa9.03□□□□□ -0.96
MRE11-209ENST00000540013 LAMC2Q13753 1193 aa9.03□□□□□ -0.96
MRE11-209ENST00000540013 PHLDB3Q6NSJ2 640 aa9.03□□□□□ -0.96
MRE11-209ENST00000540013 NSFL1CQ9UNZ2 370 aaKnown RBP9.03□□□□□ -0.96
MRE11-209ENST00000540013 COX20Q5RI15 118 aa9.02□□□□□ -0.97
MRE11-209ENST00000540013 FAM177A1Q8N128 213 aaPredicted RBP9.02□□□□□ -0.97
MRE11-209ENST00000540013 ABTB2Q8N961 1025 aa9.02□□□□□ -0.97
MRE11-209ENST00000540013 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
MRE11-209ENST00000540013 EPB42P16452 691 aa9.01□□□□□ -0.97
MRE11-209ENST00000540013 NAA30Q147X3 362 aaPredicted RBP9.01□□□□□ -0.97
MRE11-209ENST00000540013 FAM13BQ9NYF5 915 aa9.01□□□□□ -0.97
MRE11-209ENST00000540013 PEG3Q9GZU2 1588 aa9□□□□□ -0.97
MRE11-209ENST00000540013 THBS1P07996 1170 aa9□□□□□ -0.97
MRE11-209ENST00000540013 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
MRE11-209ENST00000540013 UBAP2LQ14157 1087 aaKnown RBP9□□□□□ -0.97
MRE11-209ENST00000540013 BTLAQ7Z6A9 289 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 618.5 ms