RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 MAGEA9P43362 315 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TPM3P06753 285 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RLBP1P12271 317 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PRIM1P49642 420 aaKnown RBP6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NFE2L2Q16236 605 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 HSCBQ8IWL3 235 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PMFBP1Q8TBY8 1022 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NOL10Q9BSC4 688 aaKnown RBP6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 DEF6Q9H4E7 631 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TNNQ9UQP3 1299 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RPS6KL1Q9Y6S9 549 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ZNF142P52746 1687 aaPredicted RBP6.87□□□□□ -1.31
RAB3GAP1-207ENST00000539493 KCNA4P22459 653 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SYT10Q6XYQ8 523 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 UBXN6Q9BZV1 441 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PSD3Q9NYI0 1048 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ADAMTSL3P82987 1691 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ANKARQ7Z5J8 1434 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TTC21AQ8NDW8 1320 aa6.86□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NRDCO43847 1150 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 BAG4O95429 457 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 IGHDP01880 384 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CYP2E1P05181 493 aaPredicted RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 GYS2P54840 703 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RBM6P78332 1123 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 IRX1P78414 480 aaPredicted RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 EIF4A2Q14240 407 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TTC31Q49AM3 519 aaPredicted RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 STAG1Q8WVM7 1258 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■■■ 154
RAB3GAP1-207ENST00000539493 LMBRD1Q9NUN5 540 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PEAK1Q9H792 1746 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ANKRD18BA2A2Z9 1011 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ERICH4A6NGS2 130 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SGSM2O43147 1006 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ANKLE2Q86XL3 938 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 GPT2Q8TD30 523 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 SSH1Q8WYL5 1049 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TATDN2Q93075 761 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 A1CFQ9NQ94 594 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 DDX49Q9Y6V7 483 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RGPD8O14715 1765 aaPredicted RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ERCC3P19447 782 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 ZKSCAN2Q63HK3 967 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PACS2Q86VP3 889 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 NGDNQ8NEJ9 315 aaKnown RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 CFAP44Q96MT7 982 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 C22orf23Q9BZE7 217 aa6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 V9GYY5 206 aaPredicted RBP6.85□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PTPRCP08575 1304 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RPS6KA5O75582 802 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 IPO7O95373 1038 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 FBXO18Q8NFZ0 1043 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PAIP2Q9BPZ3 127 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 THUMPD2Q9BTF0 503 aaKnown RBP6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 FMN2Q9NZ56 1722 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 RNF20Q5VTR2 975 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 FAM184AQ8NB25 1140 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 GOLGA5Q8TBA6 731 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 TSPAN18Q96SJ8 248 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 PIK3C2AO00443 1686 aa6.84□□□□□ -1.31
RAB3GAP1-207ENST00000539493 FAM177BA6PVY3 158 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 TRIM66O15016 1216 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 TRIM27P14373 513 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MAP2K2P36507 400 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 BIRC2Q13490 618 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MVPQ14764 893 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MMS22LQ6ZRQ5 1243 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 DZIP1LQ8IYY4 767 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 RGPD1P0DJD0 1748 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MAP3K19Q56UN5 1328 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 CHD2O14647 1828 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 MPHOSPH10O00566 681 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 SULT6B1Q6IMI4 303 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ZNF513Q8N8E2 541 aaPredicted RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ANKRD20A12PQ8NF67 263 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 DRC1Q96MC2 740 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 IFT57Q9NWB7 429 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 LCMT1Q9UIC8 334 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 RRP15Q9Y3B9 282 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 NUCB2P80303 420 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 BMS1Q14692 1282 aaKnown RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ALDH1L2Q3SY69 923 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 KMT5BQ4FZB7 885 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ATF7IPQ6VMQ6 1270 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 ERCC4Q92889 916 aaPredicted RBP6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 FAXDC2Q96IV6 333 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 TMX1Q9H3N1 280 aa6.83□□□□□ -1.32
RAB3GAP1-207ENST00000539493 NOB1Q9ULX3 412 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms