RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 FSTL1Q12841 308 aa18.52■□□□□ 0.56
CCND1-204ENST00000539241 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
CCND1-204ENST00000539241 CNKSR1Q969H4 720 aa18.52■□□□□ 0.56
CCND1-204ENST00000539241 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
CCND1-204ENST00000539241 SRGNP10124 158 aa18.51■□□□□ 0.55
CCND1-204ENST00000539241 STYK1Q6J9G0 422 aa18.51■□□□□ 0.55
CCND1-204ENST00000539241 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
CCND1-204ENST00000539241 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
CCND1-204ENST00000539241 MASTLQ96GX5 879 aa18.5■□□□□ 0.55
CCND1-204ENST00000539241 SBF1O95248 1867 aa18.5■□□□□ 0.55
CCND1-204ENST00000539241 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
CCND1-204ENST00000539241 RGL2O15211 777 aa18.49■□□□□ 0.55
CCND1-204ENST00000539241 PRPF40BQ6NWY9 871 aaKnown RBP18.49■□□□□ 0.55
CCND1-204ENST00000539241 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
CCND1-204ENST00000539241 BCORQ6W2J9 1755 aa18.49■□□□□ 0.55
CCND1-204ENST00000539241 DNAJC5GQ8N7S2 189 aa18.48■□□□□ 0.55
CCND1-204ENST00000539241 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
CCND1-204ENST00000539241 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
CCND1-204ENST00000539241 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
CCND1-204ENST00000539241 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
CCND1-204ENST00000539241 VEGFAP15692 232 aaPredicted RBP18.47■□□□□ 0.55
CCND1-204ENST00000539241 EIF4A1P60842 406 aaKnown RBP18.47■□□□□ 0.55
CCND1-204ENST00000539241 ERFEQ4G0M1 354 aa18.47■□□□□ 0.55
CCND1-204ENST00000539241 TPTE2Q6XPS3 522 aa18.47■□□□□ 0.55
CCND1-204ENST00000539241 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
CCND1-204ENST00000539241 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
CCND1-204ENST00000539241 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
CCND1-204ENST00000539241 FAM177BA6PVY3 158 aa18.46■□□□□ 0.55
CCND1-204ENST00000539241 HLFQ16534 295 aa18.46■□□□□ 0.55
CCND1-204ENST00000539241 SOGA3Q5TF21 947 aa18.46■□□□□ 0.55
CCND1-204ENST00000539241 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
CCND1-204ENST00000539241 KLRG2A4D1S0 409 aaPredicted RBP18.45■□□□□ 0.54
CCND1-204ENST00000539241 NPR1P16066 1061 aa18.45■□□□□ 0.54
CCND1-204ENST00000539241 HTRA3P83110 453 aa18.45■□□□□ 0.54
CCND1-204ENST00000539241 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
CCND1-204ENST00000539241 NGEFQ8N5V2 710 aa18.45■□□□□ 0.54
CCND1-204ENST00000539241 RALBP1Q15311 655 aa18.44■□□□□ 0.54
CCND1-204ENST00000539241 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
CCND1-204ENST00000539241 ERVV-1B6SEH8 477 aa18.43■□□□□ 0.54
CCND1-204ENST00000539241 C7orf43Q8WVR3 580 aa18.43■□□□□ 0.54
CCND1-204ENST00000539241 POTECB2RU33 542 aa18.42■□□□□ 0.54
CCND1-204ENST00000539241 GTF2E1P29083 439 aaPredicted RBP18.42■□□□□ 0.54
CCND1-204ENST00000539241 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
CCND1-204ENST00000539241 MAP3K15Q6ZN16 1313 aa18.42■□□□□ 0.54
CCND1-204ENST00000539241 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 MYL6BP14649 208 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 SLX4Q8IY92 1834 aa18.41■□□□□ 0.54
CCND1-204ENST00000539241 RIPK4P57078 832 aa18.4■□□□□ 0.54
CCND1-204ENST00000539241 NYXQ9GZU5 481 aa18.4■□□□□ 0.54
CCND1-204ENST00000539241 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
CCND1-204ENST00000539241 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
CCND1-204ENST00000539241 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.54
CCND1-204ENST00000539241 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
CCND1-204ENST00000539241 ABCC12Q96J65 1359 aa18.39■□□□□ 0.53
CCND1-204ENST00000539241 DDNO94850 711 aaPredicted RBP18.38■□□□□ 0.53
CCND1-204ENST00000539241 ALDH1B1P30837 517 aa18.38■□□□□ 0.53
CCND1-204ENST00000539241 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCND1-204ENST00000539241 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
CCND1-204ENST00000539241 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
CCND1-204ENST00000539241 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
CCND1-204ENST00000539241 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
CCND1-204ENST00000539241 GPTP24298 496 aa18.37■□□□□ 0.53
CCND1-204ENST00000539241 TMPOP42166 694 aaKnown RBP18.37■□□□□ 0.53
CCND1-204ENST00000539241 LMOD3Q0VAK6 560 aa18.37■□□□□ 0.53
CCND1-204ENST00000539241 OLFM4Q6UX06 510 aa18.37■□□□□ 0.53
CCND1-204ENST00000539241 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
CCND1-204ENST00000539241 UBN2Q6ZU65 1347 aa18.36■□□□□ 0.53
CCND1-204ENST00000539241 RTKN2Q8IZC4 609 aa18.36■□□□□ 0.53
CCND1-204ENST00000539241 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
CCND1-204ENST00000539241 ZNF277Q9NRM2 450 aaPredicted RBP18.36■□□□□ 0.53
CCND1-204ENST00000539241 CCDC88AQ3V6T2 1871 aa18.35■□□□□ 0.53
CCND1-204ENST00000539241 ARFGEF2Q9Y6D5 1785 aa18.35■□□□□ 0.53
CCND1-204ENST00000539241 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
CCND1-204ENST00000539241 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
CCND1-204ENST00000539241 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
CCND1-204ENST00000539241 GIGYF2Q6Y7W6 1299 aaKnown RBP18.35■□□□□ 0.53
CCND1-204ENST00000539241 JMYQ8N9B5 988 aa18.35■□□□□ 0.53
CCND1-204ENST00000539241 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
CCND1-204ENST00000539241 LRP10Q7Z4F1 713 aa18.34■□□□□ 0.53
CCND1-204ENST00000539241 ZNF34Q8IZ26 560 aa18.34■□□□□ 0.53
CCND1-204ENST00000539241 NTSR2O95665 410 aa18.33■□□□□ 0.52
CCND1-204ENST00000539241 PDIA6Q15084 440 aa18.33■□□□□ 0.52
CCND1-204ENST00000539241 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
CCND1-204ENST00000539241 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
CCND1-204ENST00000539241 RPGRQ92834 1020 aaKnown RBP18.33■□□□□ 0.52
CCND1-204ENST00000539241 L3MBTL3Q96JM7 780 aaPredicted RBP18.33■□□□□ 0.52
CCND1-204ENST00000539241 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
CCND1-204ENST00000539241 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.52
CCND1-204ENST00000539241 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 PROSER3Q2NL68 480 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 CHADLQ6NUI6 762 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 CACNA1SQ13698 1873 aa18.32■□□□□ 0.52
CCND1-204ENST00000539241 ZNF541Q9H0D2 1346 aa18.31■□□□□ 0.52
CCND1-204ENST00000539241 ANXA1P04083 346 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms