RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 PDE6BP35913 854 aa22.97■■□□□ 1.27
PDCD2-207ENST00000539212 NBPF10Q6P3W6 841 aaKnown RBP22.97■■□□□ 1.27
PDCD2-207ENST00000539212 NBPF15Q8N660 670 aa22.97■■□□□ 1.27
PDCD2-207ENST00000539212 NPHP1O15259 732 aa22.95■■□□□ 1.26
PDCD2-207ENST00000539212 NUP98P52948 1817 aa22.95■■□□□ 1.26
PDCD2-207ENST00000539212 ST5P78524 1137 aa22.94■■□□□ 1.26
PDCD2-207ENST00000539212 ZC3H4Q9UPT8 1303 aaKnown RBP22.93■■□□□ 1.26
PDCD2-207ENST00000539212 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
PDCD2-207ENST00000539212 THUMPD2Q9BTF0 503 aaKnown RBP22.93■■□□□ 1.26
PDCD2-207ENST00000539212 TAF7Q15545 349 aaPredicted RBP22.92■■□□□ 1.26
PDCD2-207ENST00000539212 DNAJC5GQ8N7S2 189 aa22.92■■□□□ 1.26
PDCD2-207ENST00000539212 PLEKHF1Q96S99 279 aa22.92■■□□□ 1.26
PDCD2-207ENST00000539212 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
PDCD2-207ENST00000539212 SRGNP10124 158 aa22.91■■□□□ 1.26
PDCD2-207ENST00000539212 NBPF5PQ86XG9 351 aaPredicted RBP22.91■■□□□ 1.26
PDCD2-207ENST00000539212 FAM177BA6PVY3 158 aa22.9■■□□□ 1.26
PDCD2-207ENST00000539212 HLFQ16534 295 aa22.9■■□□□ 1.26
PDCD2-207ENST00000539212 PRPF40BQ6NWY9 871 aaKnown RBP22.9■■□□□ 1.26
PDCD2-207ENST00000539212 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
PDCD2-207ENST00000539212 FSTL1Q12841 308 aa22.89■■□□□ 1.25
PDCD2-207ENST00000539212 STYK1Q6J9G0 422 aa22.89■■□□□ 1.25
PDCD2-207ENST00000539212 ZNF652Q9Y2D9 606 aa22.89■■□□□ 1.25
PDCD2-207ENST00000539212 CLEC4GQ6UXB4 293 aa22.88■■□□□ 1.25
PDCD2-207ENST00000539212 NGEFQ8N5V2 710 aa22.88■■□□□ 1.25
PDCD2-207ENST00000539212 NIP7Q9Y221 180 aaKnown RBP eCLIP22.88■■□□□ 1.25
PDCD2-207ENST00000539212 NFE2L2Q16236 605 aa22.87■■□□□ 1.25
PDCD2-207ENST00000539212 CNKSR1Q969H4 720 aa22.87■■□□□ 1.25
PDCD2-207ENST00000539212 MASTLQ96GX5 879 aa22.87■■□□□ 1.25
PDCD2-207ENST00000539212 TAOK3Q9H2K8 898 aa22.87■■□□□ 1.25
PDCD2-207ENST00000539212 POTECB2RU33 542 aa22.86■■□□□ 1.25
PDCD2-207ENST00000539212 NEFMP07197 916 aa22.86■■□□□ 1.25
PDCD2-207ENST00000539212 ERFEQ4G0M1 354 aa22.86■■□□□ 1.25
PDCD2-207ENST00000539212 SMC1BQ8NDV3 1235 aa22.86■■□□□ 1.25
PDCD2-207ENST00000539212 VEGFAP15692 232 aaPredicted RBP22.85■■□□□ 1.25
PDCD2-207ENST00000539212 OLFM4Q6UX06 510 aa22.85■■□□□ 1.25
PDCD2-207ENST00000539212 ABCC12Q96J65 1359 aa22.85■■□□□ 1.25
PDCD2-207ENST00000539212 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
PDCD2-207ENST00000539212 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
PDCD2-207ENST00000539212 IFFO2Q5TF58 517 aa22.84■■□□□ 1.25
PDCD2-207ENST00000539212 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
PDCD2-207ENST00000539212 PCNTO95613 3336 aa22.82■■□□□ 1.24
PDCD2-207ENST00000539212 MYL6BP14649 208 aa22.82■■□□□ 1.24
PDCD2-207ENST00000539212 TTLL7Q6ZT98 887 aa22.82■■□□□ 1.24
PDCD2-207ENST00000539212 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
PDCD2-207ENST00000539212 RRP7AQ9Y3A4 280 aaKnown RBP22.82■■□□□ 1.24
PDCD2-207ENST00000539212 NPR1P16066 1061 aa22.81■■□□□ 1.24
PDCD2-207ENST00000539212 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
PDCD2-207ENST00000539212 C7orf43Q8WVR3 580 aa22.81■■□□□ 1.24
PDCD2-207ENST00000539212 KLRG1Q96E93 195 aa22.81■■□□□ 1.24
PDCD2-207ENST00000539212 KLRG2A4D1S0 409 aaPredicted RBP22.8■■□□□ 1.24
PDCD2-207ENST00000539212 NUTM1Q86Y26 1132 aa22.8■■□□□ 1.24
PDCD2-207ENST00000539212 DDNO94850 711 aaPredicted RBP22.79■■□□□ 1.24
PDCD2-207ENST00000539212 DPY19L2Q6NUT2 758 aa22.79■■□□□ 1.24
PDCD2-207ENST00000539212 ZBTB3Q9H5J0 574 aa22.79■■□□□ 1.24
PDCD2-207ENST00000539212 MAP3K15Q6ZN16 1313 aa22.79■■□□□ 1.24
PDCD2-207ENST00000539212 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 RGL2O15211 777 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 GPTP24298 496 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 CCDC93Q567U6 631 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 SOGA3Q5TF21 947 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 UBN2Q6ZU65 1347 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 SCN4AP35499 1836 aa22.78■■□□□ 1.24
PDCD2-207ENST00000539212 POTEIP0CG38 1075 aa22.77■■□□□ 1.24
PDCD2-207ENST00000539212 POTEJP0CG39 1038 aa22.77■■□□□ 1.24
PDCD2-207ENST00000539212 SLC51AQ86UW1 340 aa22.77■■□□□ 1.24
PDCD2-207ENST00000539212 ZNF277Q9NRM2 450 aaPredicted RBP22.77■■□□□ 1.24
PDCD2-207ENST00000539212 GTF2E1P29083 439 aaPredicted RBP22.76■■□□□ 1.23
PDCD2-207ENST00000539212 KIF6Q6ZMV9 814 aa22.76■■□□□ 1.23
PDCD2-207ENST00000539212 TSPYL4Q9UJ04 414 aa22.76■■□□□ 1.23
PDCD2-207ENST00000539212 LAMB2P55268 1798 aa22.76■■□□□ 1.23
PDCD2-207ENST00000539212 ZNF541Q9H0D2 1346 aa22.75■■□□□ 1.23
PDCD2-207ENST00000539212 SNED1Q8TER0 1413 aa22.74■■□□□ 1.23
PDCD2-207ENST00000539212 ERVV-1B6SEH8 477 aa22.74■■□□□ 1.23
PDCD2-207ENST00000539212 RIPK4P57078 832 aa22.74■■□□□ 1.23
PDCD2-207ENST00000539212 FKBP4Q02790 459 aaKnown RBP eCLIP22.74■■□□□ 1.23
PDCD2-207ENST00000539212 COL4A5P29400 1685 aa22.74■■□□□ 1.23
PDCD2-207ENST00000539212 ANXA1P04083 346 aa22.73■■□□□ 1.23
PDCD2-207ENST00000539212 SUSD4Q5VX71 490 aa22.73■■□□□ 1.23
PDCD2-207ENST00000539212 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
PDCD2-207ENST00000539212 JMYQ8N9B5 988 aa22.73■■□□□ 1.23
PDCD2-207ENST00000539212 PNNQ9H307 717 aaKnown RBP22.73■■□□□ 1.23
PDCD2-207ENST00000539212 DDX10Q13206 875 aaKnown RBP22.72■■□□□ 1.23
PDCD2-207ENST00000539212 RALBP1Q15311 655 aa22.72■■□□□ 1.23
PDCD2-207ENST00000539212 PROSER3Q2NL68 480 aa22.72■■□□□ 1.23
PDCD2-207ENST00000539212 CRY2Q49AN0 593 aa22.72■■□□□ 1.23
PDCD2-207ENST00000539212 NYXQ9GZU5 481 aa22.72■■□□□ 1.23
PDCD2-207ENST00000539212 EIF2S2P20042 333 aaKnown RBP22.71■■□□□ 1.23
PDCD2-207ENST00000539212 TMPOP42166 694 aaKnown RBP22.71■■□□□ 1.23
PDCD2-207ENST00000539212 PDIA6Q15084 440 aa22.71■■□□□ 1.23
PDCD2-207ENST00000539212 C3orf67Q6ZVT6 689 aa22.71■■□□□ 1.23
PDCD2-207ENST00000539212 LRP10Q7Z4F1 713 aa22.71■■□□□ 1.23
PDCD2-207ENST00000539212 ADAMTSL1Q8N6G6 1762 aa22.71■■□□□ 1.23
PDCD2-207ENST00000539212 IBTKQ9P2D0 1353 aaPredicted RBP22.7■■□□□ 1.22
PDCD2-207ENST00000539212 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.22
PDCD2-207ENST00000539212 NTSR2O95665 410 aa22.69■■□□□ 1.22
PDCD2-207ENST00000539212 ALDH1B1P30837 517 aa22.69■■□□□ 1.22
PDCD2-207ENST00000539212 CHADLQ6NUI6 762 aa22.69■■□□□ 1.22
PDCD2-207ENST00000539212 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
PDCD2-207ENST00000539212 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
PDCD2-207ENST00000539212 ERBB4Q15303 1308 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms