RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.33
CLPB-210ENST00000539148 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
CLPB-210ENST00000539148 NUP98P52948 1817 aa12.96□□□□□ -0.33
CLPB-210ENST00000539148 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 TCERG1O14776 1098 aaKnown RBP12.95□□□□□ -0.34
CLPB-210ENST00000539148 BCAR3O75815 825 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 CCT4P50991 539 aaKnown RBP12.95□□□□□ -0.34
CLPB-210ENST00000539148 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
CLPB-210ENST00000539148 CLEC4GQ6UXB4 293 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
CLPB-210ENST00000539148 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
CLPB-210ENST00000539148 MAP3K15Q6ZN16 1313 aa12.94□□□□□ -0.34
CLPB-210ENST00000539148 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
CLPB-210ENST00000539148 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
CLPB-210ENST00000539148 KCNQ4P56696 695 aa12.94□□□□□ -0.34
CLPB-210ENST00000539148 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
CLPB-210ENST00000539148 DZIP1LQ8IYY4 767 aaKnown RBP12.94□□□□□ -0.34
CLPB-210ENST00000539148 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
CLPB-210ENST00000539148 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
CLPB-210ENST00000539148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.93□□□□□ -0.34
CLPB-210ENST00000539148 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 MSH5O43196 834 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 AAMPQ13685 434 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 AKT1S1Q96B36 256 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
CLPB-210ENST00000539148 NARFQ9UHQ1 456 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
CLPB-210ENST00000539148 PHF14O94880 888 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 ANXA1P04083 346 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 PROSER3Q2NL68 480 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
CLPB-210ENST00000539148 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 TUBGCP6Q96RT7 1819 aa12.92□□□□□ -0.34
CLPB-210ENST00000539148 ALDH1L1O75891 902 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 TRIM27P14373 513 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 PIP4K2AP48426 406 aaPredicted RBP12.91□□□□□ -0.34
CLPB-210ENST00000539148 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 SLC4A10Q6U841 1118 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 LRP10Q7Z4F1 713 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 LINS1Q8NG48 757 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
CLPB-210ENST00000539148 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
CLPB-210ENST00000539148 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
CLPB-210ENST00000539148 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
CLPB-210ENST00000539148 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
CLPB-210ENST00000539148 G2E3Q7L622 706 aa12.9□□□□□ -0.34
CLPB-210ENST00000539148 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
CLPB-210ENST00000539148 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
CLPB-210ENST00000539148 LRP5O75197 1615 aa12.9□□□□□ -0.34
CLPB-210ENST00000539148 ABCC4O15439 1325 aa12.89□□□□□ -0.35
CLPB-210ENST00000539148 USP42Q9H9J4 1324 aaKnown RBP12.89□□□□□ -0.35
CLPB-210ENST00000539148 TRIM28Q13263 835 aaKnown RBP12.89□□□□□ -0.35
CLPB-210ENST00000539148 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
CLPB-210ENST00000539148 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
CLPB-210ENST00000539148 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
CLPB-210ENST00000539148 PPP1R42Q7Z4L9 355 aa12.89□□□□□ -0.35
CLPB-210ENST00000539148 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
CLPB-210ENST00000539148 NPHP1O15259 732 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 GNAI3P08754 354 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 ZNF827Q17R98 1081 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 MYD88Q99836 296 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 NYXQ9GZU5 481 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
CLPB-210ENST00000539148 ADCY9O60503 1353 aa12.88□□□□□ -0.35
CLPB-210ENST00000539148 USPL1Q5W0Q7 1092 aa12.87□□□□□ -0.35
CLPB-210ENST00000539148 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
CLPB-210ENST00000539148 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
CLPB-210ENST00000539148 CARMIL3Q8ND23 1372 aa12.86□□□□□ -0.35
CLPB-210ENST00000539148 F6X3S4 739 aa12.86□□□□□ -0.35
CLPB-210ENST00000539148 GTF2E1P29083 439 aaPredicted RBP12.86□□□□□ -0.35
CLPB-210ENST00000539148 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
CLPB-210ENST00000539148 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLPB-210ENST00000539148 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
CLPB-210ENST00000539148 PLIN1O60240 522 aa12.85□□□□□ -0.35
CLPB-210ENST00000539148 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
CLPB-210ENST00000539148 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
CLPB-210ENST00000539148 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
CLPB-210ENST00000539148 ANO8Q9HCE9 1232 aaPredicted RBP12.85□□□□□ -0.35
CLPB-210ENST00000539148 MYH3P11055 1940 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 NEURL1BA8MQ27 555 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 UBTFL1P0CB47 393 aaPredicted RBP12.84□□□□□ -0.35
CLPB-210ENST00000539148 GYS1P13807 737 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 TMEM57Q8N5G2 664 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
CLPB-210ENST00000539148 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
CLPB-210ENST00000539148 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms