RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 NSFL1CQ9UNZ2 370 aaKnown RBP20.37■□□□□ 0.85
SH2B3-202ENST00000538307 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
SH2B3-202ENST00000538307 NPHP3Q7Z494 1330 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 SNX14Q9Y5W7 946 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 GLRX3O76003 335 aaKnown RBP20.36■□□□□ 0.85
SH2B3-202ENST00000538307 MBD3O95983 291 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 PROSER3Q2NL68 480 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
SH2B3-202ENST00000538307 OS9Q13438 667 aaPredicted RBP20.35■□□□□ 0.85
SH2B3-202ENST00000538307 C9orf78Q9NZ63 289 aaPredicted RBP20.34■□□□□ 0.85
SH2B3-202ENST00000538307 LRSAM1Q6UWE0 723 aa20.34■□□□□ 0.85
SH2B3-202ENST00000538307 CWC27Q6UX04 472 aaKnown RBP20.34■□□□□ 0.85
SH2B3-202ENST00000538307 CLASRPQ8N2M8 674 aaKnown RBP20.34■□□□□ 0.85
SH2B3-202ENST00000538307 TTC14Q96N46 770 aa20.34■□□□□ 0.85
SH2B3-202ENST00000538307 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
SH2B3-202ENST00000538307 PRAMEF22A3QJZ6 481 aa20.33■□□□□ 0.84
SH2B3-202ENST00000538307 RASEFQ8IZ41 740 aa20.33■□□□□ 0.84
SH2B3-202ENST00000538307 HDAC5Q9UQL6 1122 aa20.33■□□□□ 0.84
SH2B3-202ENST00000538307 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
SH2B3-202ENST00000538307 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
SH2B3-202ENST00000538307 HYPKQ9NX55 129 aa20.32■□□□□ 0.84
SH2B3-202ENST00000538307 WDR33Q9C0J8 1336 aaKnown RBP20.32■□□□□ 0.84
SH2B3-202ENST00000538307 SYCE3A1L190 88 aa20.31■□□□□ 0.84
SH2B3-202ENST00000538307 ERC1Q8IUD2 1116 aa20.31■□□□□ 0.84
SH2B3-202ENST00000538307 ECHDC1Q9NTX5 307 aa20.31■□□□□ 0.84
SH2B3-202ENST00000538307 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
SH2B3-202ENST00000538307 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
SH2B3-202ENST00000538307 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
SH2B3-202ENST00000538307 AK2P54819 239 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 NAP1L5Q96NT1 182 aaPredicted RBP20.3■□□□□ 0.84
SH2B3-202ENST00000538307 DIAPH3Q9NSV4 1193 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 ZSCAN30Q86W11 494 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 RUFY2Q8WXA3 655 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
SH2B3-202ENST00000538307 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
SH2B3-202ENST00000538307 UTYO14607 1347 aa20.29■□□□□ 0.84
SH2B3-202ENST00000538307 RPAP1Q9BWH6 1393 aaPredicted RBP20.29■□□□□ 0.84
SH2B3-202ENST00000538307 GPATCH3Q96I76 525 aa20.29■□□□□ 0.84
SH2B3-202ENST00000538307 GRM8O00222 908 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 IFIT2P09913 472 aaKnown RBP20.28■□□□□ 0.84
SH2B3-202ENST00000538307 RUFY3Q7L099 469 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 DDX21Q9NR30 783 aaKnown RBP eCLIP20.28■□□□□ 0.84
SH2B3-202ENST00000538307 LIMCH1Q9UPQ0 1083 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 ADAMTS7Q9UKP4 1686 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
SH2B3-202ENST00000538307 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
SH2B3-202ENST00000538307 PDIA6Q15084 440 aa20.27■□□□□ 0.84
SH2B3-202ENST00000538307 HS1BP3Q53T59 392 aa20.27■□□□□ 0.84
SH2B3-202ENST00000538307 TOM1O60784 492 aa20.26■□□□□ 0.83
SH2B3-202ENST00000538307 DDX58O95786 925 aaKnown RBP20.26■□□□□ 0.83
SH2B3-202ENST00000538307 PTH1RQ03431 593 aa20.26■□□□□ 0.83
SH2B3-202ENST00000538307 AACSQ86V21 672 aa20.26■□□□□ 0.83
SH2B3-202ENST00000538307 EVI5LQ96CN4 794 aa20.26■□□□□ 0.83
SH2B3-202ENST00000538307 KCNB2Q92953 911 aa20.26■□□□□ 0.83
SH2B3-202ENST00000538307 SASH1O94885 1247 aa20.25■□□□□ 0.83
SH2B3-202ENST00000538307 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 FOXD4L6Q3SYB3 417 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 FOXD4L3Q6VB84 417 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
SH2B3-202ENST00000538307 BICC1Q9H694 974 aaKnown RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 GADD45BO75293 160 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 SYAP1Q96A49 352 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 GDPD2Q9HCC8 539 aa20.25■□□□□ 0.83
SH2B3-202ENST00000538307 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-202ENST00000538307 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-202ENST00000538307 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
SH2B3-202ENST00000538307 TMEM87AQ8NBN3 555 aa20.24■□□□□ 0.83
SH2B3-202ENST00000538307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-202ENST00000538307 ERBB3P21860 1342 aa20.24■□□□□ 0.83
SH2B3-202ENST00000538307 CPA1P15085 419 aa20.23■□□□□ 0.83
SH2B3-202ENST00000538307 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
SH2B3-202ENST00000538307 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
SH2B3-202ENST00000538307 G3BP1Q13283 466 aaKnown RBP eCLIP20.23■□□□□ 0.83
SH2B3-202ENST00000538307 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
SH2B3-202ENST00000538307 PRPF40BQ6NWY9 871 aaKnown RBP20.23■□□□□ 0.83
SH2B3-202ENST00000538307 EAF2Q96CJ1 260 aaPredicted RBP20.23■□□□□ 0.83
SH2B3-202ENST00000538307 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
SH2B3-202ENST00000538307 SOS2Q07890 1332 aaPredicted RBP20.23■□□□□ 0.83
SH2B3-202ENST00000538307 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 SYT1P21579 422 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 ADCK5Q3MIX3 580 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 TNS3Q68CZ2 1445 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 STX6O43752 255 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 LARGE1O95461 756 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 PIP4K2BP78356 416 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 JAKMIP1Q96N16 626 aaKnown RBP20.22■□□□□ 0.83
SH2B3-202ENST00000538307 TSPY26PQ9H489 355 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 PDRG1Q9NUG6 133 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 SMC3Q9UQE7 1217 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
SH2B3-202ENST00000538307 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
SH2B3-202ENST00000538307 UBAP1LF5GYI3 381 aa20.21■□□□□ 0.83
SH2B3-202ENST00000538307 MSNP26038 577 aaKnown RBP20.21■□□□□ 0.83
SH2B3-202ENST00000538307 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms