RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 ASAP1Q9ULH1 1129 aa15.91■□□□□ 0.14
LINC01089-204ENST00000535643 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
LINC01089-204ENST00000535643 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
LINC01089-204ENST00000535643 HSPA5P11021 654 aaKnown RBP15.9■□□□□ 0.14
LINC01089-204ENST00000535643 ZNF296Q8WUU4 475 aaPredicted RBP15.9■□□□□ 0.14
LINC01089-204ENST00000535643 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
LINC01089-204ENST00000535643 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
LINC01089-204ENST00000535643 RC3H1Q5TC82 1133 aaKnown RBP15.89■□□□□ 0.13
LINC01089-204ENST00000535643 PRO3102Q9H379 93 aa15.89■□□□□ 0.13
LINC01089-204ENST00000535643 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
LINC01089-204ENST00000535643 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
LINC01089-204ENST00000535643 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
LINC01089-204ENST00000535643 ZNF622Q969S3 477 aaKnown RBP eCLIP15.87■□□□□ 0.133e-6■□□□□ 10.4
LINC01089-204ENST00000535643 ZNF408Q9H9D4 720 aa15.87■□□□□ 0.13
LINC01089-204ENST00000535643 CNTNAP4Q9C0A0 1308 aa15.87■□□□□ 0.13
LINC01089-204ENST00000535643 LAMB4A4D0S4 1761 aa15.87■□□□□ 0.13
LINC01089-204ENST00000535643 CD163L1Q9NR16 1453 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 HUNKP57058 714 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 GPC2Q8N158 579 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
LINC01089-204ENST00000535643 CYP27B1O15528 508 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 IP6K1Q92551 441 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 CSRNP1Q96S65 589 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 KDRP35968 1356 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 RBBP6Q7Z6E9 1792 aaKnown RBP15.85■□□□□ 0.13
LINC01089-204ENST00000535643 PIEZO1Q92508 2521 aa15.85■□□□□ 0.13
LINC01089-204ENST00000535643 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
LINC01089-204ENST00000535643 AFDNP55196 1824 aaKnown RBP15.83■□□□□ 0.12
LINC01089-204ENST00000535643 EPS15P42566 896 aa15.83■□□□□ 0.12
LINC01089-204ENST00000535643 USP50Q70EL3 339 aaPredicted RBP15.83■□□□□ 0.12
LINC01089-204ENST00000535643 DEFB123Q8N688 67 aa15.83■□□□□ 0.12
LINC01089-204ENST00000535643 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.12
LINC01089-204ENST00000535643 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
LINC01089-204ENST00000535643 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
LINC01089-204ENST00000535643 RGMBQ6NW40 437 aa15.82■□□□□ 0.12
LINC01089-204ENST00000535643 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
LINC01089-204ENST00000535643 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
LINC01089-204ENST00000535643 FZD9O00144 591 aa15.81■□□□□ 0.12
LINC01089-204ENST00000535643 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
LINC01089-204ENST00000535643 NRXN2Q9P2S2 1712 aa15.81■□□□□ 0.12
LINC01089-204ENST00000535643 SCNN1DP51172 638 aa15.8■□□□□ 0.12
LINC01089-204ENST00000535643 NFIXQ14938 502 aa15.8■□□□□ 0.12
LINC01089-204ENST00000535643 Q7L0L9 218 aa15.8■□□□□ 0.12
LINC01089-204ENST00000535643 RAPGEF4Q8WZA2 1011 aa15.8■□□□□ 0.12
LINC01089-204ENST00000535643 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
LINC01089-204ENST00000535643 RGPD2P0DJD1 1756 aa15.8■□□□□ 0.12
LINC01089-204ENST00000535643 MYH14Q7Z406 1995 aaKnown RBP15.79■□□□□ 0.12
LINC01089-204ENST00000535643 SERPINB2P05120 415 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 CCDC102AQ96A19 550 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 TMOD3Q9NYL9 352 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 EYSQ5T1H1 3165 aa15.79■□□□□ 0.12
LINC01089-204ENST00000535643 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
LINC01089-204ENST00000535643 SOGA3Q5TF21 947 aa15.78■□□□□ 0.12
LINC01089-204ENST00000535643 COL5A3P25940 1745 aaPredicted RBP15.77■□□□□ 0.12
LINC01089-204ENST00000535643 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.12
LINC01089-204ENST00000535643 TBC1D8O95759 1140 aa15.77■□□□□ 0.12
LINC01089-204ENST00000535643 NBPF6Q5VWK0 638 aa15.77■□□□□ 0.12
LINC01089-204ENST00000535643 NBPF4Q96M43 638 aa15.77■□□□□ 0.12
LINC01089-204ENST00000535643 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
LINC01089-204ENST00000535643 LAMA2P24043 3122 aaKnown RBP15.77■□□□□ 0.11
LINC01089-204ENST00000535643 SYNGAP1Q96PV0 1343 aa15.76■□□□□ 0.11
LINC01089-204ENST00000535643 A0A1W2PPC1 479 aa15.76■□□□□ 0.11
LINC01089-204ENST00000535643 USPL1Q5W0Q7 1092 aa15.76■□□□□ 0.11
LINC01089-204ENST00000535643 MTMR10Q9NXD2 777 aa15.76■□□□□ 0.11
LINC01089-204ENST00000535643 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
LINC01089-204ENST00000535643 ZNF157P51786 506 aaPredicted RBP15.75■□□□□ 0.11
LINC01089-204ENST00000535643 GPR153Q6NV75 609 aa15.75■□□□□ 0.11
LINC01089-204ENST00000535643 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
LINC01089-204ENST00000535643 NME9Q86XW9 330 aa15.75■□□□□ 0.11
LINC01089-204ENST00000535643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC01089-204ENST00000535643 L3MBTL2Q969R5 705 aa15.75■□□□□ 0.11
LINC01089-204ENST00000535643 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
LINC01089-204ENST00000535643 SLX4Q8IY92 1834 aa15.74■□□□□ 0.11
LINC01089-204ENST00000535643 TMEM265A0A087WTH1 108 aa15.74■□□□□ 0.11
LINC01089-204ENST00000535643 GPR25O00155 361 aa15.74■□□□□ 0.11
LINC01089-204ENST00000535643 FKBP4Q02790 459 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01089-204ENST00000535643 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
LINC01089-204ENST00000535643 NKX1-1Q15270 411 aaPredicted RBP15.73■□□□□ 0.11
LINC01089-204ENST00000535643 MRS2Q9HD23 443 aa15.73■□□□□ 0.11
LINC01089-204ENST00000535643 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
LINC01089-204ENST00000535643 SLC10A3P09131 477 aa15.72■□□□□ 0.11
LINC01089-204ENST00000535643 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
LINC01089-204ENST00000535643 PRUNE2Q8WUY3 3088 aa15.71■□□□□ 0.11
LINC01089-204ENST00000535643 ZPR1O75312 459 aa15.71■□□□□ 0.11
LINC01089-204ENST00000535643 HOXC9P31274 260 aa15.71■□□□□ 0.11
LINC01089-204ENST00000535643 CRKLP46109 303 aaKnown RBP15.71■□□□□ 0.11
LINC01089-204ENST00000535643 NOM1Q5C9Z4 860 aaKnown RBP15.71■□□□□ 0.11
LINC01089-204ENST00000535643 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
LINC01089-204ENST00000535643 KIF7Q2M1P5 1343 aa15.7■□□□□ 0.1
LINC01089-204ENST00000535643 ZNF831Q5JPB2 1677 aa15.7■□□□□ 0.1
LINC01089-204ENST00000535643 CCDC93Q567U6 631 aa15.7■□□□□ 0.1
LINC01089-204ENST00000535643 REM2Q8IYK8 340 aaPredicted RBP15.7■□□□□ 0.1
LINC01089-204ENST00000535643 C7orf43Q8WVR3 580 aa15.7■□□□□ 0.1
LINC01089-204ENST00000535643 CNKSR1Q969H4 720 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms