RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
HTATSF1-204ENST00000535601 ABCC6O95255 1503 aa22.49■■□□□ 1.19
HTATSF1-204ENST00000535601 ZBTB3Q9H5J0 574 aa22.49■■□□□ 1.19
HTATSF1-204ENST00000535601 MRC1P22897 1456 aa22.49■■□□□ 1.19
HTATSF1-204ENST00000535601 ALDH1L1O75891 902 aa22.48■■□□□ 1.19
HTATSF1-204ENST00000535601 UBE3BQ7Z3V4 1068 aa22.47■■□□□ 1.19
HTATSF1-204ENST00000535601 NEXNQ0ZGT2 675 aa22.47■■□□□ 1.19
HTATSF1-204ENST00000535601 GCKRQ14397 625 aa22.47■■□□□ 1.19
HTATSF1-204ENST00000535601 GLI3P10071 1580 aa22.46■■□□□ 1.19
HTATSF1-204ENST00000535601 METTL22Q9BUU2 404 aaPredicted RBP22.46■■□□□ 1.19
HTATSF1-204ENST00000535601 IL25Q9H293 177 aa22.46■■□□□ 1.19
HTATSF1-204ENST00000535601 PIGBQ92521 554 aa22.46■■□□□ 1.19
HTATSF1-204ENST00000535601 TMOD3Q9NYL9 352 aa22.46■■□□□ 1.19
HTATSF1-204ENST00000535601 TOGARAM1Q9Y4F4 1720 aa22.45■■□□□ 1.18
HTATSF1-204ENST00000535601 ERVV-2B6SEH9 535 aa22.44■■□□□ 1.18
HTATSF1-204ENST00000535601 HSCBQ8IWL3 235 aa22.44■■□□□ 1.18
HTATSF1-204ENST00000535601 OSBPL3Q9H4L5 887 aa22.44■■□□□ 1.18
HTATSF1-204ENST00000535601 USP26Q9BXU7 913 aa22.44■■□□□ 1.18
HTATSF1-204ENST00000535601 KIF1BPQ96EK5 621 aa22.43■■□□□ 1.18
HTATSF1-204ENST00000535601 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
HTATSF1-204ENST00000535601 ANTXR1Q9H6X2 564 aa22.42■■□□□ 1.18
HTATSF1-204ENST00000535601 CCDC9Q9Y3X0 531 aaKnown RBP22.42■■□□□ 1.18
HTATSF1-204ENST00000535601 A0A087WZG4 1122 aa22.42■■□□□ 1.18
HTATSF1-204ENST00000535601 DNAJC10Q8IXB1 793 aa22.42■■□□□ 1.18
HTATSF1-204ENST00000535601 CCDC8Q9H0W5 538 aaPredicted RBP22.42■■□□□ 1.18
HTATSF1-204ENST00000535601 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
HTATSF1-204ENST00000535601 TLR7Q9NYK1 1049 aaKnown RBP22.41■■□□□ 1.18
HTATSF1-204ENST00000535601 CHMP3Q9Y3E7 222 aa22.41■■□□□ 1.18
HTATSF1-204ENST00000535601 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
HTATSF1-204ENST00000535601 KCPQ6ZWJ8 1503 aa22.4■■□□□ 1.18
HTATSF1-204ENST00000535601 SASH1O94885 1247 aa22.4■■□□□ 1.18
HTATSF1-204ENST00000535601 ARFGEF2Q9Y6D5 1785 aa22.4■■□□□ 1.18
HTATSF1-204ENST00000535601 RAB11FIP3O75154 756 aa22.39■■□□□ 1.18
HTATSF1-204ENST00000535601 CASC1Q6TDU7 716 aa22.39■■□□□ 1.18
HTATSF1-204ENST00000535601 TUBGCP6Q96RT7 1819 aa22.39■■□□□ 1.17
HTATSF1-204ENST00000535601 AACSQ86V21 672 aa22.39■■□□□ 1.17
HTATSF1-204ENST00000535601 ACSBG1Q96GR2 724 aa22.39■■□□□ 1.17
HTATSF1-204ENST00000535601 COL16A1Q07092 1604 aaPredicted RBP22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 MTX1Q13505 466 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 CCDC85AQ96PX6 553 aaPredicted RBP22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 STAP2Q9UGK3 403 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 ERC2O15083 957 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 CHMLP26374 656 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 ANO2Q9NQ90 1003 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 ATG3Q9NT62 314 aa22.38■■□□□ 1.17
HTATSF1-204ENST00000535601 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
HTATSF1-204ENST00000535601 EAF2Q96CJ1 260 aaPredicted RBP22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 AK9Q5TCS8 1911 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 CLASRPQ8N2M8 674 aaKnown RBP22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 SLC4A9Q96Q91 983 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 ESYT1Q9BSJ8 1104 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 LTBP4Q8N2S1 1624 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 EP400Q96L91 3159 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 UTYO14607 1347 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 G3BP1Q13283 466 aaKnown RBP eCLIP22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 PALD1Q9ULE6 856 aa22.36■■□□□ 1.17
HTATSF1-204ENST00000535601 UBR2Q8IWV8 1755 aa22.35■■□□□ 1.17
HTATSF1-204ENST00000535601 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
HTATSF1-204ENST00000535601 ITGB4P16144 1822 aa22.35■■□□□ 1.17
HTATSF1-204ENST00000535601 EXOC5O00471 708 aa22.35■■□□□ 1.17
HTATSF1-204ENST00000535601 LAMB4A4D0S4 1761 aa22.35■■□□□ 1.17
HTATSF1-204ENST00000535601 IFIT2P09913 472 aaKnown RBP22.34■■□□□ 1.17
HTATSF1-204ENST00000535601 NOL8Q76FK4 1167 aaKnown RBP22.34■■□□□ 1.17
HTATSF1-204ENST00000535601 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
HTATSF1-204ENST00000535601 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.17
HTATSF1-204ENST00000535601 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
HTATSF1-204ENST00000535601 CWC27Q6UX04 472 aaKnown RBP22.33■■□□□ 1.16
HTATSF1-204ENST00000535601 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
HTATSF1-204ENST00000535601 EDC3Q96F86 508 aaKnown RBP22.32■■□□□ 1.16
HTATSF1-204ENST00000535601 ZNF594Q96JF6 807 aaPredicted RBP22.32■■□□□ 1.16
HTATSF1-204ENST00000535601 REC8O95072 547 aa22.31■■□□□ 1.16
HTATSF1-204ENST00000535601 HSP90AB4PQ58FF6 505 aa22.31■■□□□ 1.16
HTATSF1-204ENST00000535601 COL14A1Q05707 1796 aaKnown RBP22.31■■□□□ 1.16
HTATSF1-204ENST00000535601 GPTP24298 496 aa22.31■■□□□ 1.16
HTATSF1-204ENST00000535601 BOLA2Q9H3K6 86 aa22.31■■□□□ 1.16
HTATSF1-204ENST00000535601 PTPN12Q05209 780 aaKnown RBP22.3■■□□□ 1.16
HTATSF1-204ENST00000535601 CASP7P55210 303 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 TFCP2Q12800 502 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 TNS2Q63HR2 1409 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 PAPPAQ13219 1627 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 AHDC1Q5TGY3 1603 aaPredicted RBP22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 SNX21Q969T3 373 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 DISP2A7MBM2 1401 aa22.29■■□□□ 1.16
HTATSF1-204ENST00000535601 CHGBP05060 677 aa22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 K7ELQ4 463 aaPredicted RBP22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 RFX5P48382 616 aaPredicted RBP22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 HLFQ16534 295 aa22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 FAM89AQ96GI7 184 aa22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
HTATSF1-204ENST00000535601 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
HTATSF1-204ENST00000535601 UPF3BQ9BZI7 483 aaKnown RBP22.27■■□□□ 1.16
HTATSF1-204ENST00000535601 PLEKHG2Q9H7P9 1386 aa22.27■■□□□ 1.16
HTATSF1-204ENST00000535601 KCNQ4P56696 695 aa22.26■■□□□ 1.15
HTATSF1-204ENST00000535601 FOXO4P98177 505 aa22.26■■□□□ 1.15
HTATSF1-204ENST00000535601 PLCH1Q4KWH8 1693 aa22.26■■□□□ 1.15
HTATSF1-204ENST00000535601 DDB1Q16531 1140 aa22.26■■□□□ 1.15
HTATSF1-204ENST00000535601 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms